RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PRKCEQ02156 737 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 QPCTQ16769 361 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 HSDL1Q3SXM5 330 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 OLFML2BQ68BL8 750 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 RHBDF2Q6PJF5 856 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 CCDC13Q8IYE1 715 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 SNF8Q96H20 258 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 SPATA33Q96N06 139 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 ARHGAP39Q9C0H5 1083 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 NSRP1Q9H0G5 558 aaKnown RBP26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 ARHGAP28Q9P2N2 729 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 STYXL1Q9Y6J8 313 aa26.48■■□□□ 1.83
RUNDC3A-201ENST00000225441 NOP56O00567 594 aaKnown RBP26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 TCF7P36402 384 aaPredicted RBP26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 ARHGAP1Q07960 439 aa26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 CCL14Q16627 93 aa26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 PCYT2Q99447 389 aa26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 FOXP3Q9BZS1 431 aa26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 ATP6V0A4Q9HBG4 840 aa26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 INTS9Q9NV88 658 aaKnown RBP26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 ANAPC7Q9UJX3 599 aa26.47■■□□□ 1.83
RUNDC3A-201ENST00000225441 TCRBV7S2A1N4TA0A589 114 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 PSTPIP1O43586 416 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 GH1P01241 217 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 CYP1A1P04798 512 aaPredicted RBP26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 KRT5P13647 590 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 IRF5Q13568 498 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 AUHQ13825 339 aaKnown RBP26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 ANKRD20A8PQ5CZ79 823 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 XKR3Q5GH77 459 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 LIN9Q5TKA1 542 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 FAM160B1Q5W0V3 765 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 TRMT1LQ7Z2T5 733 aaKnown RBP26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 PIGWQ7Z7B1 504 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 CCDC50Q8IVM0 306 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 BSNDQ8WZ55 320 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 ARID2Q68CP9 1835 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 TLDC2A0PJX2 215 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 HNRNPDLO14979 420 aaKnown RBP26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 LAMC2Q13753 1193 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 FBXW10Q5XX13 1052 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 ATL2Q8NHH9 583 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 POP1Q99575 1024 aaKnown RBP26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 SELENOSQ9BQE4 189 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 RNF186Q9NXI6 227 aa26.46■■□□□ 1.83
RUNDC3A-201ENST00000225441 ZSWIM8A7E2V4 1837 aa26.45■■□□□ 1.83
RUNDC3A-201ENST00000225441 CLDN3O15551 220 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 RASSF9O75901 435 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 GSTA1P08263 222 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 ATP4AP20648 1035 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 KRT17Q04695 432 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 ZACNQ401N2 412 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 GJC2Q5T442 439 aaPredicted RBP26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 BTBD6Q96KE9 485 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 CCDC114Q96M63 670 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 SH2D3AQ9BRG2 576 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 OSBPL7Q9BZF2 842 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 LRRC4CQ9HCJ2 640 aa26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 MRPL47Q9HD33 250 aaKnown RBP26.45■■□□□ 1.82
RUNDC3A-201ENST00000225441 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 TRPA1O75762 1119 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 PROSCO94903 275 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 PIGRP01833 764 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 IGHA2P01877 340 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 NSFP46459 744 aaKnown RBP26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 STAT5BP51692 787 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 SP3Q02447 781 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 DUSP28Q4G0W2 176 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 IQSEC1Q6DN90 963 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 SLFN12LQ6IEE8 588 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 RELL1Q8IUW5 271 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 MDM1Q8TC05 714 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 CCT6BQ92526 530 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 DCLK3Q9C098 648 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 ACP6Q9NPH0 428 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 SEPT9Q9UHD8 586 aaPredicted RBP26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 THSD7BQ9C0I4 1608 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 LGR5O75473 907 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 OATP04181 439 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 EMID1Q96A84 441 aaPredicted RBP26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 TRAIPQ9BWF2 469 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 TOPORSQ9NS56 1045 aaPredicted RBP26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 PTPN22Q9Y2R2 807 aa26.44■■□□□ 1.82
RUNDC3A-201ENST00000225441 CCT8L1PA6NM43 557 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 DNAJC8O75937 253 aaPredicted RBP26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 LDHAP00338 332 aaKnown RBP26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 DLATP10515 647 aaKnown RBP26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 SMPD1P17405 629 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 IFI35P80217 286 aaPredicted RBP26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 CCNG2Q16589 344 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 BICD1Q96G01 975 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 DDX27Q96GQ7 796 aaKnown RBP26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 KIFC3Q9BVG8 833 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 CYP26B1Q9NR63 512 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 SAMD15Q9P1V8 674 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 CHORDC1Q9UHD1 332 aaPredicted RBP26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 CNTN6Q9UQ52 1028 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 SCINQ9Y6U3 715 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 MROH7Q68CQ1 1323 aa26.43■■□□□ 1.82
RUNDC3A-201ENST00000225441 FGFR4P22455 802 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms