RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 FSCN2O14926 492 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 SYN3O14994 580 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 PMM2O15305 246 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 P4HA2O15460 535 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 ODC1P11926 461 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 COPB1P53618 953 aaKnown RBP28.6■■■□□ 2.17
STUB1-201ENST00000219548 TPM4P67936 248 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 NOP14P78316 857 aaKnown RBP28.6■■■□□ 2.17
STUB1-201ENST00000219548 DSG1Q02413 1049 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 PTPN14Q15678 1187 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 ZNF667Q5HYK9 610 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 PRSS55Q6UWB4 352 aaPredicted RBP28.6■■■□□ 2.17
STUB1-201ENST00000219548 APTXQ7Z2E3 356 aaKnown RBP28.6■■■□□ 2.17
STUB1-201ENST00000219548 CRACR2AQ9BSW2 395 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 APOBEC3GQ9HC16 384 aaKnown RBP28.6■■■□□ 2.17
STUB1-201ENST00000219548 L1RE1Q9UN81 338 aa28.6■■■□□ 2.17
STUB1-201ENST00000219548 CXCL14O95715 111 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 TNNC1P63316 161 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 VARS2Q5ST30 1063 aaKnown RBP28.59■■■□□ 2.17
STUB1-201ENST00000219548 KIAA0319Q5VV43 1072 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 WSCD1Q658N2 575 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 SCARA5Q6ZMJ2 495 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 TAF4BQ92750 862 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 MRPL38Q96DV4 380 aaKnown RBP28.59■■■□□ 2.17
STUB1-201ENST00000219548 MMS19Q96T76 1030 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.59■■■□□ 2.17
STUB1-201ENST00000219548 HIDE1A8MVS5 230 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 HUS1O60921 280 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 CETN1Q12798 172 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 SMC1AQ14683 1233 aaKnown RBP28.59■■■□□ 2.17
STUB1-201ENST00000219548 PTPROQ16827 1216 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 GAS2L3Q86XJ1 694 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 CCDC150Q8NCX0 1101 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 APPL2Q8NEU8 664 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 MRPL17Q9NRX2 175 aaKnown RBP28.59■■■□□ 2.17
STUB1-201ENST00000219548 GCNT4Q9P109 453 aa28.59■■■□□ 2.17
STUB1-201ENST00000219548 TPM2P07951 284 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 LRMPQ12912 555 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 SOWAHAQ2M3V2 549 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 PDCL2Q8N4E4 241 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 LMO3Q8TAP4 145 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 MYLIPQ8WY64 445 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 PIK3R5Q8WYR1 880 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 GUCD1Q96NT3 240 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 SMYD3Q9H7B4 428 aa28.58■■■□□ 2.17
STUB1-201ENST00000219548 CYP11A1P05108 521 aa28.57■■■□□ 2.16
STUB1-201ENST00000219548 TYMPP19971 482 aa28.57■■■□□ 2.16
STUB1-201ENST00000219548 IGFBP4P22692 258 aa28.57■■■□□ 2.16
STUB1-201ENST00000219548 RAP1GAPP47736 663 aa28.57■■■□□ 2.16
STUB1-201ENST00000219548 YWHAHQ04917 246 aaPredicted RBP28.57■■■□□ 2.16
STUB1-201ENST00000219548 PSMD5Q16401 504 aa28.57■■■□□ 2.16
STUB1-201ENST00000219548 TOP6BLQ8N6T0 577 aa28.57■■■□□ 2.16
STUB1-201ENST00000219548 LNX1Q8TBB1 728 aaPredicted RBP28.57■■■□□ 2.16
STUB1-201ENST00000219548 TATDN2Q93075 761 aa28.57■■■□□ 2.16
STUB1-201ENST00000219548 GAS2L1Q99501 681 aaPredicted RBP28.57■■■□□ 2.16
STUB1-201ENST00000219548 CDX2Q99626 313 aaPredicted RBP28.57■■■□□ 2.16
STUB1-201ENST00000219548 INTS2Q9H0H0 1204 aaKnown RBP28.57■■■□□ 2.16
STUB1-201ENST00000219548 NGRNQ9NPE2 291 aaKnown RBP28.57■■■□□ 2.16
STUB1-201ENST00000219548 C2orf71A6NGG8 1288 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 LILRB3O75022 631 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 RPL17P18621 184 aaKnown RBP28.56■■■□□ 2.16
STUB1-201ENST00000219548 ASPAP45381 313 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 WDR44Q5JSH3 913 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 OVOS1Q6IE37 1185 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 GBP6Q6ZN66 633 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 MRPL43Q8N983 215 aaKnown RBP28.56■■■□□ 2.16
STUB1-201ENST00000219548 EHBP1Q8NDI1 1231 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 PLXNA3P51805 1871 aa28.56■■■□□ 2.16
STUB1-201ENST00000219548 ARHGEF37A1IGU5 675 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 LRRC10BA6NIK2 292 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 BMS1Q14692 1282 aaKnown RBP28.55■■■□□ 2.16
STUB1-201ENST00000219548 ANKS3Q6ZW76 656 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 LIMS2Q7Z4I7 341 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 ADGRD2Q7Z7M1 963 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 OSTM1Q86WC4 334 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 GLYCTKQ8IVS8 523 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 ADGRF2Q8IZF7 708 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 MRPL45Q9BRJ2 306 aaKnown RBP28.55■■■□□ 2.16
STUB1-201ENST00000219548 ANP32EQ9BTT0 268 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 NIF3L1Q9GZT8 377 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 SDCBP2Q9H190 292 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 MTMR10Q9NXD2 777 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 DSEQ9UL01 958 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 IRAK3Q9Y616 596 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 MTCH2Q9Y6C9 303 aa28.55■■■□□ 2.16
STUB1-201ENST00000219548 GTPBP10A4D1E9 387 aaKnown RBP28.54■■■□□ 2.16
STUB1-201ENST00000219548 LGALS16A8MUM7 142 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 SLC9A1P19634 815 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 CDH8P55286 799 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 MRPL58Q14197 206 aaKnown RBP28.54■■■□□ 2.16
STUB1-201ENST00000219548 EXOC3L4Q17RC7 722 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 PDE12Q6L8Q7 609 aaKnown RBP28.54■■■□□ 2.16
STUB1-201ENST00000219548 RSPO2Q6UXX9 243 aaPredicted RBP28.54■■■□□ 2.16
STUB1-201ENST00000219548 METTL23Q86XA0 190 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 KBTBD7Q8WVZ9 684 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 RBSNQ9H1K0 784 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 SSX2IPQ9Y2D8 614 aa28.54■■■□□ 2.16
STUB1-201ENST00000219548 OAZ2O95190 189 aa28.53■■■□□ 2.16
STUB1-201ENST00000219548 CNPP09543 421 aaKnown RBP28.53■■■□□ 2.16
STUB1-201ENST00000219548 P4HA1P13674 534 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms