RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CYP3A43Q9HB55 503 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 APEX2Q9UBZ4 518 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 PLXNA4Q9HCM2 1894 aa14.12□□□□□ -0.15
TIMP1-201ENST00000218388 H3BNC9 293 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 H7C4K7 107 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 I3L4J1 428 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 TEX33O43247 280 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 URODP06132 367 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 TRIM21P19474 475 aaKnown RBP14.11□□□□□ -0.15
TIMP1-201ENST00000218388 SLC9A1P19634 815 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 GLUD2P49448 558 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 GCNT1Q02742 428 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 GPM6BQ13491 265 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 CUL2Q13617 745 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 SPOPLQ6IQ16 392 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 SCARA5Q6ZMJ2 495 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 ENOSF1Q7L5Y1 443 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 CEP57Q86XR8 500 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 RNF168Q8IYW5 571 aaPredicted RBP14.11□□□□□ -0.15
TIMP1-201ENST00000218388 ADGRF2Q8IZF7 708 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 NEK11Q8NG66 645 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 TTPALQ9BTX7 342 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 OXCT2Q9BYC2 517 aaPredicted RBP14.11□□□□□ -0.15
TIMP1-201ENST00000218388 XPO4Q9C0E2 1151 aaKnown RBP14.11□□□□□ -0.15
TIMP1-201ENST00000218388 LMAN2LQ9H0V9 348 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 APOBEC3GQ9HC16 384 aaKnown RBP14.11□□□□□ -0.15
TIMP1-201ENST00000218388 PLCB1Q9NQ66 1216 aa14.11□□□□□ -0.15
TIMP1-201ENST00000218388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.11□□□□□ -0.154e-6■□□□□ 9.6
TIMP1-201ENST00000218388 LPXNO60711 386 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 TACC1O75410 805 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 CYP11A1P05108 521 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 FGFR3P22607 806 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 TKTP29401 623 aaKnown RBP14.1□□□□□ -0.15
TIMP1-201ENST00000218388 ASPAP45381 313 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 LHX1P48742 406 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 MFAP3P55082 362 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 CREMQ03060 361 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 YWHAHQ04917 246 aaPredicted RBP14.1□□□□□ -0.15
TIMP1-201ENST00000218388 KCNMA1Q12791 1236 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 SCARA3Q6AZY7 606 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 SMYD5Q6GMV2 418 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 OVOS1Q6IE37 1185 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
TIMP1-201ENST00000218388 ZNF280DQ6N043 979 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 ANKS3Q6ZW76 656 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 GPR65Q8IYL9 337 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 VPS52Q8N1B4 723 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 THEM5Q8N1Q8 247 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 PDCL2Q8N4E4 241 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 SPPL3Q8TCT6 385 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 POF1BQ8WVV4 589 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 JAKMIP2Q96AA8 810 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 BCO2Q9BYV7 579 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 SNX25Q9H3E2 840 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 CERS4Q9HA82 394 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 ALG13Q9NP73 1137 aaKnown RBP14.1□□□□□ -0.15
TIMP1-201ENST00000218388 ENTPD7Q9NQZ7 604 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 TLR9Q9NR96 1032 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 MRPL17Q9NRX2 175 aaKnown RBP14.1□□□□□ -0.15
TIMP1-201ENST00000218388 POLIQ9UNA4 740 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 SIK3Q9Y2K2 1263 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 TSC2P49815 1807 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 TRIOBPQ9H2D6 2365 aa14.1□□□□□ -0.15
TIMP1-201ENST00000218388 VWA8A3KMH1 1905 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 LRRN2O75325 713 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 EFEMP2O95967 443 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 CTSAP10619 480 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 WARSP23381 471 aaKnown RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 IGFBP6P24592 240 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 DSG1Q02413 1049 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 PTPROQ16827 1216 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 SOWAHAQ2M3V2 549 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 VARS2Q5ST30 1063 aaKnown RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 ZNF697Q5TEC3 545 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 KLHDC7AQ5VTJ3 777 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 WSCD1Q658N2 575 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 TMC7Q7Z402 723 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 SPRED2Q7Z698 418 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 OR6B3Q8NGW1 331 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 RIN2Q8WYP3 895 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 PIK3R5Q8WYR1 880 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 TATDN2Q93075 761 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 NUP58Q9BVL2 599 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 VN1R3Q9BXE9 311 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 ZBP1Q9H171 429 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 SMYD3Q9H7B4 428 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 UBE2TQ9NPD8 197 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 NGRNQ9NPE2 291 aaKnown RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.154e-7■□□□□ 10.7
TIMP1-201ENST00000218388 CHST7Q9NS84 486 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 FAM207AQ9NSI2 230 aaPredicted RBP14.09□□□□□ -0.15
TIMP1-201ENST00000218388 L1RE1Q9UN81 338 aa14.09□□□□□ -0.15
TIMP1-201ENST00000218388 COL4A4P53420 1690 aaPredicted RBP14.08□□□□□ -0.16
TIMP1-201ENST00000218388 UCHL3P15374 230 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 PCSK1P29120 753 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 CA8P35219 290 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 GNL1P36915 607 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms