RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 KAZNQ674X7 775 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 IFNLR1Q8IU57 520 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 SLC5A5Q92911 643 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 TEKT1Q969V4 418 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 DNAJC18Q9H819 358 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 MEGF6O75095 1541 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 BTNL10A8MVZ5 291 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 BCRP11274 1271 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 COL6A2P12110 1019 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 RFC1P35251 1148 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 MAP3K10Q02779 954 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 TRMT5Q32P41 509 aaKnown RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 TCHHL1Q5QJ38 904 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 SIX5Q8N196 739 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 ARHGEF1Q92888 912 aaKnown RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 CFAP57Q96MR6 1250 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 CSRNP1Q96S65 589 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 ANKRD2Q9GZV1 360 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 PCYOX1Q9UHG3 505 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 SLC7A8Q9UHI5 535 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 LOC100653049A0A140TA62 436 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 RSPH10B2B2RC85 870 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 GNPATO15228 680 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 KRT34O76011 436 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 RSPH10BP0C881 870 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 OCM2P0CE71 109 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 OCMP0CE72 109 aaPredicted RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 RCAN1P53805 252 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 PSMC1P62191 440 aaKnown RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 IRX4P78413 519 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 DHDDSQ86SQ9 333 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 TRABD2AQ86V40 505 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 ZBED8Q8IZ13 594 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 FNDC8Q8TC99 324 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 DHRS1Q96LJ7 313 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 RRN3Q9NYV6 651 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 NEU2Q9Y3R4 380 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 HBS1LQ9Y450 684 aaKnown RBP15.43■□□□□ 0.06
PTPRA-201ENST00000216877 DTNAQ9Y4J8 743 aa15.43■□□□□ 0.06
PTPRA-201ENST00000216877 MEIS1O00470 390 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 TBC1D12O60347 775 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 PUM3Q15397 648 aaKnown RBP15.42■□□□□ 0.06
PTPRA-201ENST00000216877 CLUL1Q15846 466 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 MYLK3Q32MK0 819 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 KRT25Q7Z3Z0 450 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 PPP1R14CQ8TAE6 165 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 STK17AQ9UEE5 414 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 IKBKGQ9Y6K9 419 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 ABCB11O95342 1321 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 MIF4GDA9UHW6 222 aaKnown RBP15.42■□□□□ 0.06
PTPRA-201ENST00000216877 LAD1O00515 517 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 FBP2O00757 339 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 TRAFD1O14545 582 aaPredicted RBP15.42■□□□□ 0.06
PTPRA-201ENST00000216877 VILLO15195 856 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 GCNT3O95395 438 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 PORP16435 677 aaPredicted RBP15.42■□□□□ 0.06
PTPRA-201ENST00000216877 BGNP21810 368 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 NCKAP1LP55160 1127 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 ITGA9Q13797 1035 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 TMPRSS6Q8IU80 811 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 TCP10LQ8TDR4 215 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 TSPAN18Q96SJ8 248 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 CRNKL1Q9BZJ0 848 aaKnown RBP15.42■□□□□ 0.06
PTPRA-201ENST00000216877 USTQ9Y2C2 406 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 RABGAP1Q9Y3P9 1069 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 PHBP35232 272 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 KPNA1P52294 538 aaPredicted RBP15.42■□□□□ 0.06
PTPRA-201ENST00000216877 SULT2A1Q06520 285 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 Q9H521 79 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 OLFML3Q9NRN5 406 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 STK32BQ9NY57 414 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 SMG5Q9UPR3 1016 aaKnown RBP15.42■□□□□ 0.06
PTPRA-201ENST00000216877 MAD1L1Q9Y6D9 718 aa15.42■□□□□ 0.06
PTPRA-201ENST00000216877 TNS3Q68CZ2 1445 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 BHMG1C9JSJ3 638 aaPredicted RBP15.41■□□□□ 0.06
PTPRA-201ENST00000216877 TRIM49P0CI25 452 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 TRIM49CP0CI26 452 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 RFC4P35249 363 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 SOX5P35711 763 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 CYP2J2P51589 502 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 GSTM4Q03013 218 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 SLC2A7Q6PXP3 512 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 ARID3BQ8IVW6 561 aaPredicted RBP15.41■□□□□ 0.06
PTPRA-201ENST00000216877 RAVER1Q8IY67 606 aaKnown RBP15.41■□□□□ 0.06
PTPRA-201ENST00000216877 SHKBP1Q8TBC3 707 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 SLC20A1Q8WUM9 679 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 ATP6V0A1Q93050 837 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 OXNAD1Q96HP4 312 aaPredicted RBP15.41■□□□□ 0.06
PTPRA-201ENST00000216877 UTP6Q9NYH9 597 aaKnown RBP15.41■□□□□ 0.06
PTPRA-201ENST00000216877 MYH4Q9Y623 1939 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 SRGAP2CP0DJJ0 459 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 SRGAP2BP0DMP2 458 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 FGFR1P11362 822 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 RAG1P15918 1043 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 RRM1P23921 792 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 PCYT1AP49585 367 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 CDK16Q00536 496 aa15.41■□□□□ 0.06
PTPRA-201ENST00000216877 OASLQ15646 514 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms