RNA–Protein interactions for RNA: ENST00000216121.11

NIPSNAP1-201, Transcript of nipsnap homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP1, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-201ENST00000216121 SSC5DA1L4H1 1573 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 MSCO60682 206 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TOM1L1O75674 476 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 LSM8O95777 96 aaKnown RBP23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CALB1P05937 261 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TNFSF9P41273 254 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 LMNB2Q03252 620 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 IZUMO3Q5VZ72 239 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ICE2Q659A1 982 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TRPM4Q8TD43 1214 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 RBM41Q96IZ5 413 aaKnown RBP23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 MTFR1LQ9H019 292 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 PPP2R3BQ9Y5P8 575 aa23.37■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TCRBV5S1A1TA0A578 114 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CCT8L1PA6NM43 557 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ZBTB7AO95365 584 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 GJC1P36383 396 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 NEDD9Q14511 834 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 LRRC38Q5VT99 294 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 HIBCHQ6NVY1 386 aaPredicted RBP23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 PWWP2AQ96N64 755 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 MRPL4Q9BYD3 311 aaKnown RBP23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 FOXP3Q9BZS1 431 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 RASSF9O75901 435 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 VIMP08670 466 aaKnown RBP23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 IFNAR2P48551 515 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 DRICH1Q6PGQ1 229 aaPredicted RBP23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 VSTM1Q6UX27 236 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TAX1BP1Q86VP1 789 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 RIOX2Q8IUF8 465 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.36■■□□□ 1.335e-9■■■□□ 16.1
NIPSNAP1-201ENST00000216121 FAM212AQ96EL1 285 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SLITRK1Q96PX8 696 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SAMD15Q9P1V8 674 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 LGALS13Q9UHV8 139 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 PPME1Q9Y570 386 aa23.36■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TMEM120BA0PK00 339 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SCTRP47872 440 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ZNF252P-AS1Q0IIN9 211 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ATP13A4Q4VNC1 1196 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SEPT1Q8WYJ6 367 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 NSRP1Q9H0G5 558 aaKnown RBP23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 GGA3Q9NZ52 723 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SOWAHBA6NEL2 793 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 LIASO43766 372 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TGFB3P10600 412 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CREB1P16220 341 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 MYL6P60660 151 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 MCL1Q07820 350 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 IER5Q5VY09 327 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CEP128Q6ZU80 1094 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ZBTB33Q86T24 672 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CCHCR1Q8TD31 782 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ACO2Q99798 780 aaKnown RBP23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TCHPQ9BT92 498 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ZNF518BQ9C0D4 1074 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 MTMR12Q9C0I1 747 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 NIF3L1Q9GZT8 377 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 BTBD7Q9P203 1132 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CTNNAL1Q9UBT7 734 aa23.35■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TJP3O95049 919 aa23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TCF4P15884 667 aa23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TCF7P36402 384 aaPredicted RBP23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SGSM1Q2NKQ1 1148 aa23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CDCA2Q69YH5 1023 aaPredicted RBP23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 GSTA5Q7RTV2 222 aa23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ZCCHC9Q8N567 271 aaKnown RBP23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TMEM35BQ8NCS4 154 aa23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ELAC2Q9BQ52 826 aaKnown RBP23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CISHQ9NSE2 258 aa23.34■■□□□ 1.33
NIPSNAP1-201ENST00000216121 PI4K2BG5E9Z4 385 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 OGTO15294 1046 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 PEX10O60683 326 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 KRT10P13645 584 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SURF1Q15526 300 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 DUOXA2Q1HG44 320 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TREML2Q5T2D2 321 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 METTL7BQ6UX53 244 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 MFSD7Q6UXD7 560 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 FAM167AQ96KS9 214 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SLC40A1Q9NP59 571 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 KLHL11Q9NVR0 708 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 IVNS1ABPQ9Y6Y0 642 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 BRD2P25440 801 aaKnown RBP23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 CDH5P33151 784 aaPredicted RBP23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 NF2P35240 595 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 COPS2P61201 443 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 TAP1Q03518 808 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 STAT4Q14765 748 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 P3H1Q32P28 736 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 SMYD5Q6GMV2 418 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 DNAJC24Q6P3W2 148 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 DNPEPQ9ULA0 475 aa23.33■■□□□ 1.33
NIPSNAP1-201ENST00000216121 ABLIM1O14639 778 aa23.32■■□□□ 1.32
NIPSNAP1-201ENST00000216121 CDH16O75309 829 aa23.32■■□□□ 1.32
NIPSNAP1-201ENST00000216121 USP2O75604 605 aaPredicted RBP23.32■■□□□ 1.32
NIPSNAP1-201ENST00000216121 KRT1P04264 644 aa23.32■■□□□ 1.32
NIPSNAP1-201ENST00000216121 PTPN7P35236 360 aa23.32■■□□□ 1.32
NIPSNAP1-201ENST00000216121 PPP1R15BQ5SWA1 713 aa23.32■■□□□ 1.32
NIPSNAP1-201ENST00000216121 PRUNE1Q86TP1 453 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms