RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 WEE2P0C1S8 567 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 CD58P19256 250 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 DEFB103AP81534 67 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 CCZ1BP86790 482 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 CCZ1P86791 482 aaPredicted RBP17.74■□□□□ 0.43
POLR2E-201ENST00000215587 UPP1Q16831 310 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 WDR59Q6PJI9 974 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 ZNF280BQ86YH2 543 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 GPIHBP1Q8IV16 184 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
POLR2E-201ENST00000215587 SMYD3Q9H7B4 428 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 CACNG4Q9UBN1 327 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.74■□□□□ 0.435e-12■□□□□ 11.3
POLR2E-201ENST00000215587 TTC3P53804 2025 aa17.74■□□□□ 0.43
POLR2E-201ENST00000215587 TTC28Q96AY4 2481 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 ARHGAP6O43182 974 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 HUS1O60921 280 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 DGKIO75912 1065 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 B3GAT3O94766 335 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 DDHD2O94830 711 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 ACO1P21399 889 aaKnown RBP17.73■□□□□ 0.43
POLR2E-201ENST00000215587 RAP1GAPP47736 663 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 OR1G1P47890 313 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 BPIFB4P59827 614 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 LILRA4P59901 499 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 PAN2Q504Q3 1202 aaKnown RBP17.73■□□□□ 0.43
POLR2E-201ENST00000215587 TMEM240Q5SV17 173 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 DCLRE1AQ6PJP8 1040 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 TMEM270Q6UE05 265 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 C16orf59Q7L2K0 433 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 TMEM139Q8IV31 216 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 COLGALT2Q8IYK4 626 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 UBR7Q8N806 425 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 RBBP8NLQ8NC74 664 aaPredicted RBP17.73■□□□□ 0.43
POLR2E-201ENST00000215587 DNAI2Q9GZS0 605 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
POLR2E-201ENST00000215587 ARHGEF37A1IGU5 675 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 SPTLC1O15269 473 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 CYP26A1O43174 497 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 CYLC1P35663 651 aaPredicted RBP17.72■□□□□ 0.43
POLR2E-201ENST00000215587 PRKCIP41743 596 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 PDE6CP51160 858 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 FAM117BQ6P1L5 589 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 DSTYKQ6XUX3 929 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 IRF2BP2Q7Z5L9 587 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 VPS36Q86VN1 386 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 APPL2Q8NEU8 664 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■■■□ 22.3
POLR2E-201ENST00000215587 PAAF1Q9BRP4 392 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 SDCBP2Q9H190 292 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 NRDE2Q9H7Z3 1164 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 CNTN6Q9UQ52 1028 aa17.72■□□□□ 0.43
POLR2E-201ENST00000215587 TDRD15B5MCY1 1934 aaKnown RBP17.72■□□□□ 0.43
POLR2E-201ENST00000215587 SSU72P8A0A1W2PR75 194 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 SOWAHDA6NJG2 315 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 TMEM189-UBE2V1I3L0A0 370 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 CYB561D2O14569 222 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 B4GALT3O60512 393 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 EIF4A3P38919 411 aaKnown RBP17.71■□□□□ 0.43
POLR2E-201ENST00000215587 MAGEA10P43363 369 aaPredicted RBP17.71■□□□□ 0.43
POLR2E-201ENST00000215587 EPHB4P54760 987 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 CDH8P55286 799 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 PTK2Q05397 1052 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 HGSNATQ68CP4 663 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 DPH6Q7L8W6 267 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 CCDC170Q8IYT3 715 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 TOP6BLQ8N6T0 577 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 C3orf58Q8NDZ4 430 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 HERVK_113Q902F9 699 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 RABGGTAQ92696 567 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 SENP8Q96LD8 212 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 CCDC42Q96M95 316 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 CHP1Q99653 195 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 TMEM175Q9BSA9 504 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 COLEC11Q9BWP8 271 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 SNX25Q9H3E2 840 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 NHEJ1Q9H9Q4 299 aaPredicted RBP17.71■□□□□ 0.43
POLR2E-201ENST00000215587 ARHGAP20Q9P2F6 1191 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 DNAJB4Q9UDY4 337 aa17.71■□□□□ 0.43
POLR2E-201ENST00000215587 BARX2Q9UMQ3 279 aaPredicted RBP17.71■□□□□ 0.43
POLR2E-201ENST00000215587 LAMA2P24043 3122 aaKnown RBP17.71■□□□□ 0.43
POLR2E-201ENST00000215587 TACC1O75410 805 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 KIF4AO95239 1232 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 FAM163BP0C2L3 166 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 ODC1P11926 461 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 ANXA13P27216 316 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 CLCN1P35523 988 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 AARSP49588 968 aaKnown RBP eCLIP17.7■□□□□ 0.42
POLR2E-201ENST00000215587 INCA1Q0VD86 236 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
POLR2E-201ENST00000215587 SOWAHAQ2M3V2 549 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 CMTR2Q8IYT2 770 aaKnown RBP17.7■□□□□ 0.42
POLR2E-201ENST00000215587 ADGRF2Q8IZF7 708 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 YME1L1Q96TA2 773 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 HAUS4Q9H6D7 363 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 L1RE1Q9UN81 338 aa17.7■□□□□ 0.42
POLR2E-201ENST00000215587 PRG3Q9Y2Y8 225 aaPredicted RBP17.7■□□□□ 0.42
POLR2E-201ENST00000215587 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms