RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 PSMA8Q8TAA3 256 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 AK8Q96MA6 479 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KIFC1Q9BW19 673 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 COA1Q9GZY4 146 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TUBGCP4Q9UGJ1 667 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 LIMA1Q9UHB6 759 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 UBN2Q6ZU65 1347 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 UMPSP11172 480 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SFNP31947 248 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ORC2Q13416 577 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 ZRANB3Q5FWF4 1079 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FBXO31Q5XUX0 539 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 C16orf87Q6PH81 154 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PNKPQ96T60 521 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GUCY1B2O75343 617 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GCP02774 474 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GUCY2CP25092 1073 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 STAT3P40763 770 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MTFR2Q6P444 385 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MAGEC3Q8TD91 643 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RIT1Q92963 219 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 NCOA5Q9HCD5 579 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 BFARQ9NZS9 450 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 COPEO14579 308 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ATF4P18848 351 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 NOS2P35228 1153 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CTDSPL2Q05D32 466 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RPAINQ86UA6 219 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CGRRF1Q99675 332 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MRPL4Q9BYD3 311 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 RIC8BQ9NVN3 520 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KLHL20Q9Y2M5 609 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 EMILIN1Q9Y6C2 1016 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ABCB11O95342 1321 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ZFYVE16Q7Z3T8 1539 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SLC9A3R1O14745 358 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 ZBTB7AO95365 584 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 IFNA16P05015 189 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MYL4P12829 197 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 COPZ1P61923 177 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SYCP2LQ5T4T6 812 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TMEM179Q6ZVK1 233 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 UNC45BQ8IWX7 931 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RTL3Q8N8U3 475 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 MAML1Q92585 1016 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 VPS11Q9H270 941 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 POLE4Q9NR33 117 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TAB2Q9NYJ8 693 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 C6P13671 934 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 INPP5AQ14642 412 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KRT74Q7RTS7 529 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CYP4X1Q8N118 509 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SUSD6Q92537 303 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ITIH6Q6UXX5 1313 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KDM5CP41229 1560 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 C2CD2LO14523 706 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FGAP02671 866 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PCYT1AP49585 367 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 UGP2Q16851 508 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SNRNP48Q6IEG0 339 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 CATSPER3Q86XQ3 398 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RMND5BQ96G75 393 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 AGBL1Q96MI9 1066 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GINM1Q9NU53 330 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KIAA0556O60303 1618 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SPTLC1O15269 473 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KRT6AP02538 564 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KRT6BP04259 564 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RXRGP48443 463 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 KRT6CP48668 564 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GPS1Q13098 491 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ARMC4Q5T2S8 1044 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 GIMAP6Q6P9H5 292 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ARMCX6Q7L4S7 300 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 RMDN3Q96TC7 470 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 TACO1Q9BSH4 297 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 ELP3Q9H9T3 547 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 DDX28Q9NUL7 540 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 SCAF8Q9UPN6 1271 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 ERICH3Q5RHP9 1530 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 M0QYV0 167 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 PGM3O95394 542 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CPA2P48052 419 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 NDUFV1P49821 464 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 MRPS35P82673 323 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 MTMR1Q13613 665 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 ELF2Q15723 593 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 BMP2KLQ5H9B9 411 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FAM20CQ8IXL6 584 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SPICE1Q8N0Z3 855 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 FAM98AQ8NCA5 519 aaKnown RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 NEK7Q8TDX7 302 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 CINPQ9BW66 212 aaPredicted RBP3.6□□□□□ -1.83
NEB-201ENST00000172853 SEPT3Q9UH03 358 aa3.6□□□□□ -1.83
NEB-201ENST00000172853 SMCO3A2RU48 225 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 CYP2A6P11509 494 aaPredicted RBP3.59□□□□□ -1.83
NEB-201ENST00000172853 CHRNB4P30926 498 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 PID1Q7Z2X4 250 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 NLRP14Q86W24 1093 aa3.59□□□□□ -1.83
NEB-201ENST00000172853 SCYL3Q8IZE3 742 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms