RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 SNX1Q13596 522 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 PPP1R2P3Q6NXS1 205 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.69■■■□□ 2.02
RTN4R-201ENST00000043402 GTF3C2Q8WUA4 911 aaPredicted RBP27.69■■■□□ 2.02
RTN4R-201ENST00000043402 ANKRD36BP1Q96IX9 119 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 SIX4Q9UIU6 781 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 POLIQ9UNA4 740 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 SPDYCQ5MJ68 293 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 RHOT1Q8IXI2 618 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 SLCO2A1Q92959 643 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 RPF1Q9H9Y2 349 aaKnown RBP27.69■■■□□ 2.02
RTN4R-201ENST00000043402 VTA1Q9NP79 307 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 PRMT7Q9NVM4 692 aaPredicted RBP27.69■■■□□ 2.02
RTN4R-201ENST00000043402 USTQ9Y2C2 406 aa27.69■■■□□ 2.02
RTN4R-201ENST00000043402 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.68■■■□□ 2.02
RTN4R-201ENST00000043402 TCRBV5S1A1TA0A578 114 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 PSTPIP1O43586 416 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 ERLIN2O94905 339 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 ECEL1O95672 775 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 IVLP07476 585 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 NFICP08651 508 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 PDCLQ13371 301 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 ANKS1BQ7Z6G8 1248 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 PPTC7Q8NI37 304 aa27.68■■■□□ 2.02
RTN4R-201ENST00000043402 NXF1Q9UBU9 619 aaKnown RBP27.68■■■□□ 2.02
RTN4R-201ENST00000043402 RBM47A0AV96 593 aaKnown RBP27.67■■■□□ 2.02
RTN4R-201ENST00000043402 EIF3HO15372 352 aaKnown RBP eCLIP27.67■■■□□ 2.02
RTN4R-201ENST00000043402 PHKA2P46019 1235 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 PMS2P54278 862 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 POU5F1BQ06416 359 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 ART4Q93070 314 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 C16orf70Q9BSU1 422 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 HEMGNQ9BXL5 484 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.67■■■□□ 2.02
RTN4R-201ENST00000043402 R3HDM2Q9Y2K5 976 aaKnown RBP27.67■■■□□ 2.02
RTN4R-201ENST00000043402 PASKQ96RG2 1323 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 TMEM191CA6NGB0 347 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 LSM8O95777 96 aaKnown RBP27.67■■■□□ 2.02
RTN4R-201ENST00000043402 SNAI1O95863 264 aaPredicted RBP27.67■■■□□ 2.02
RTN4R-201ENST00000043402 RALAP11233 206 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 KLF1Q13351 362 aaPredicted RBP27.67■■■□□ 2.02
RTN4R-201ENST00000043402 FAM187BQ17R55 369 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 C1orf127Q8N9H9 656 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 ZSWIM8A7E2V4 1837 aa27.67■■■□□ 2.02
RTN4R-201ENST00000043402 LACTBL1A8MY62 500 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 TP73O15350 636 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 VTNP04004 478 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 KRT19P08727 400 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 TCF4P15884 667 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 GBP1P32455 592 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 RAP1GAPP47736 663 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 ZNF252P-AS1Q0IIN9 211 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 RNF25Q96BH1 459 aaPredicted RBP27.66■■■□□ 2.02
RTN4R-201ENST00000043402 PABPC3Q9H361 631 aaKnown RBP27.66■■■□□ 2.02
RTN4R-201ENST00000043402 CWC15Q9P013 229 aaKnown RBP27.66■■■□□ 2.02
RTN4R-201ENST00000043402 PARP2Q9UGN5 583 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 SCN4AP35499 1836 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 IL18RAPO95256 599 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 STAG3L1P0CL83 205 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 KRT17Q04695 432 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 PPP1R7Q15435 360 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 UBAP2Q5T6F2 1119 aaKnown RBP27.66■■■□□ 2.02
RTN4R-201ENST00000043402 MAP1SQ66K74 1059 aaPredicted RBP27.66■■■□□ 2.02
RTN4R-201ENST00000043402 RUFY4Q6ZNE9 571 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 CCDC50Q8IVM0 306 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 KATNAL2Q8IYT4 538 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 TMEM35BQ8NCS4 154 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 BRI3BPQ8WY22 251 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 EMID1Q96A84 441 aaPredicted RBP27.66■■■□□ 2.02
RTN4R-201ENST00000043402 CPB2Q96IY4 423 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 DCLK3Q9C098 648 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 PDZD7Q9H5P4 517 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 PCDHGC3Q9UN70 934 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 AKT3Q9Y243 479 aa27.66■■■□□ 2.02
RTN4R-201ENST00000043402 CCL15-CCL14A0A0B4J2E2 113 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 MAGEB2O15479 319 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 SHBGP04278 402 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 CETPP11597 493 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 CDH5P33151 784 aaPredicted RBP27.65■■■□□ 2.02
RTN4R-201ENST00000043402 MAN1A1P33908 653 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 CCL15Q16663 113 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 IFNLR1Q8IU57 520 aaPredicted RBP27.65■■■□□ 2.02
RTN4R-201ENST00000043402 PPFIA4O75335 1185 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 CALB1P05937 261 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 GJC1P36383 396 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 GUCY1A3Q02108 690 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 ATP13A4Q4VNC1 1196 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 CXorf38Q8TB03 319 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 MAIP1Q8WWC4 291 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 IP6K2Q9UHH9 426 aa27.65■■■□□ 2.02
RTN4R-201ENST00000043402 EIF4BP23588 611 aaKnown RBP27.64■■■□□ 2.02
RTN4R-201ENST00000043402 SSR1P43307 286 aaKnown RBP27.64■■■□□ 2.02
RTN4R-201ENST00000043402 CDH8P55286 799 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 OGDHQ02218 1023 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 WDR72Q3MJ13 1102 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 JADE1Q6IE81 842 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 MCEEQ96PE7 176 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 ZNF518BQ9C0D4 1074 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 SDCBP2Q9H190 292 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 SEMA4AQ9H3S1 761 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms