RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 FOXK2Q01167 660 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 PLD1Q13393 1074 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 DHX8Q14562 1220 aaKnown RBP17.22■□□□□ 0.35
ERCC1-201ENST00000013807 OVOS1Q6IE37 1185 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 JADE1Q6IE81 842 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 USP49Q70CQ1 688 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 USP37Q86T82 979 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 TMC8Q8IU68 726 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 HS6ST3Q8IZP7 471 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 DEPDC1BQ8WUY9 529 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 IRF7Q92985 503 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 EPSTI1Q96J88 318 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 ZSWIM3Q96MP5 696 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 TRMT61BQ9BVS5 477 aaKnown RBP17.22■□□□□ 0.35
ERCC1-201ENST00000013807 DNAJC25Q9H1X3 360 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 CRISPLD1Q9H336 500 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 ASAH2Q9NR71 780 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 SEL1LQ9UBV2 794 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 MRPS17Q9Y2R5 130 aaKnown RBP17.22■□□□□ 0.35
ERCC1-201ENST00000013807 YIPF1Q9Y548 306 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 ASB3Q9Y575 518 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 TIMM13Q9Y5L4 95 aaPredicted RBP17.22■□□□□ 0.35
ERCC1-201ENST00000013807 ZNF638Q14966 1978 aaKnown RBP17.22■□□□□ 0.35
ERCC1-201ENST00000013807 ANKRD63C9JTQ0 380 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 MAN2B1O00754 1011 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 PPEF2O14830 753 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
ERCC1-201ENST00000013807 TARSP26639 723 aaKnown RBP17.21■□□□□ 0.35
ERCC1-201ENST00000013807 GUCY2FP51841 1108 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 DUSP4Q13115 394 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 UBXN2BQ14CS0 331 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 ZC2HC1CQ53FD0 456 aaPredicted RBP17.21■□□□□ 0.35
ERCC1-201ENST00000013807 VITQ6UXI7 678 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 TPRG1Q6ZUI0 275 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 NT5DC4Q86YG4 428 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 MFSD6LQ8IWD5 586 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
ERCC1-201ENST00000013807 SENP8Q96LD8 212 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 HEBP1Q9NRV9 189 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 FBXO2Q9UK22 296 aaPredicted RBP17.21■□□□□ 0.35
ERCC1-201ENST00000013807 CLIC4Q9Y696 253 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 R4GN57 208 aa17.21■□□□□ 0.35
ERCC1-201ENST00000013807 OBSL1O75147 1896 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 KIF26AQ9ULI4 1882 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-201ENST00000013807 MTMR11A4FU01 709 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 ARNTLO00327 626 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 SPTLC1O15269 473 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 NFICP08651 508 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 ODC1P11926 461 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 CD72P21854 359 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 WEE1P30291 646 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 ADSSP30520 456 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 ACOT2P49753 483 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 EPHB3P54753 998 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 TMEM132DQ14C87 1099 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 POSTNQ15063 836 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 ADALQ6DHV7 355 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 CRELD2Q6UXH1 353 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-201ENST00000013807 ZBTB44Q8NCP5 570 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 SHKBP1Q8TBC3 707 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 PSMG2Q969U7 264 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 DNAJC19Q96DA6 116 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
ERCC1-201ENST00000013807 BRD9Q9H8M2 597 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 ZNF334Q9HCZ1 680 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-201ENST00000013807 AGO2Q9UKV8 859 aaKnown RBP17.2■□□□□ 0.34
ERCC1-201ENST00000013807 DSEQ9UL01 958 aa17.2■□□□□ 0.34
ERCC1-201ENST00000013807 LAMTOR5O43504 91 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 FGF19O95750 216 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 OR4Q2P0C623 313 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 FCHO2Q0JRZ9 810 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 SMARCB1Q12824 385 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 RESTQ13127 1097 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 TEAD2Q15562 447 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 SUMF1Q8NBK3 374 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 RASSF8Q8NHQ8 419 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 ZSCAN18Q8TBC5 510 aaPredicted RBP17.19■□□□□ 0.34
ERCC1-201ENST00000013807 IER2Q9BTL4 223 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 OLFML3Q9NRN5 406 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 PCDHGA2Q9Y5H1 932 aa17.19■□□□□ 0.34
ERCC1-201ENST00000013807 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 MYMKA6NI61 221 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 MYL4P12829 197 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 GAP43P17677 238 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 SYT1P21579 422 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 ALDH1A3P47895 512 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 TUFMP49411 452 aaKnown RBP17.18■□□□□ 0.34
ERCC1-201ENST00000013807 ARMCX5Q6P1M9 558 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 GAREM2Q75VX8 874 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 DNAJB7Q7Z6W7 309 aaPredicted RBP17.18■□□□□ 0.34
ERCC1-201ENST00000013807 SFR1Q86XK3 245 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 ATAD1Q8NBU5 361 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 C2orf15Q8WU43 125 aaKnown RBP17.18■□□□□ 0.34
ERCC1-201ENST00000013807 PGLYRP2Q96PD5 576 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 MKNK1Q9BUB5 465 aa17.18■□□□□ 0.34
ERCC1-201ENST00000013807 FAM126AQ9BYI3 521 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms