RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Kdm1bQ8CIG3 826 aa14.12□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Lrrc56Q8K375 552 aa14.12□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Slc25a11Q9CR62 314 aaKnown RBP14.12□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Fam133bQ9CVI2 245 aaKnown RBP14.12□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Fam212aQ9CX62 282 aa14.12□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 PolkQ9QUG2 852 aa14.12□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Btbd19S4R1I0 287 aa14.12□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Ralgapa2A3KGS3 1872 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Col11a1Q61245 1804 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Fam155bA2BDP1 471 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 RxrbP28704 520 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Ctnnd1P30999 938 aaKnown RBP14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Igsf9Q05BQ1 1179 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Dzip1lQ499E4 774 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 HnrnpdQ60668 355 aaKnown RBP14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Cyp3a16Q64481 504 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Ahcyl2Q68FL4 613 aaKnown RBP14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Gba2Q69ZF3 918 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Wdtc1Q80ZK9 677 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Fbxo38Q8BMI0 1194 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Rell1Q8K2J7 272 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Tom1l1Q923U0 474 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Slc12a6Q924N4 1150 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Snf8Q9CZ28 258 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 PirQ9D711 290 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Wdr83Q9DAJ4 315 aaKnown RBP14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Akt3Q9WUA6 479 aa14.11□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Gm1661E9Q963 441 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Gm42641I6L9G2 585 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Chrna1P04756 457 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Myl1P05977 188 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Atf2P16951 487 aaKnown RBP14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Xrcc6P23475 608 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Drg1P32233 367 aaKnown RBP14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Arf4P61750 180 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Cracr2aQ3UP38 310 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Tdrd5Q5VCS6 1040 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Slitrk1Q810C1 696 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Rnf187Q8BFX1 236 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 L3mbtl3Q8BLB7 883 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 AtripQ8BMG1 785 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Usp27Q8CEG8 438 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 CarfQ8VHI4 689 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Trim60Q8VI40 466 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Dnajc14Q921R4 703 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Me2Q99KE1 589 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Tbc1d15Q9CXF4 671 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Bbs5Q9CZQ9 341 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Polr3eQ9CZT4 710 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Cul2Q9D4H8 745 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Slc22a3Q9WTW5 551 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Nup210lQ9D2F7 1881 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Abcb5B5X0E4 1255 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Acp4D3YTS9 425 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Gm7995L7N2E4 160 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 CopeO89079 308 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Mtco1P00397 514 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Rpl7aP12970 266 aaKnown RBP14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Kcnj4P52189 445 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Gabrb2P63137 512 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Smyd1P97443 490 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Ect2Q07139 913 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Ppm1jQ149T7 507 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Mpzl3Q3V3F6 237 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Etaa1Q5SVT3 877 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Nacc1Q7TSZ8 514 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Vat1lQ80TB8 417 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Aste1Q8BIR2 672 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Grik4Q8BMF5 956 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Zmynd15Q8C0R7 736 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 PdgfcQ8CI19 345 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Btbd6Q8K2J9 488 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Olfr397Q8VEZ6 315 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Foxp3Q99JB6 429 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Gimap4Q99JY3 219 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Tas1r1Q99PG6 842 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Trap1Q9CQN1 706 aaKnown RBP14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Cuedc2Q9CXX9 284 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Dusp21Q9D9D8 189 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Scyl3Q9DBQ7 735 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 GgcxQ9QYC7 757 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Klrc2Q9WTJ9 238 aa14.1□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Fam171a1A2ATK9 892 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Tatdn2B7ZNL9 783 aaKnown RBP14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Rfx8D3YU81 596 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Hsd17b14E9Q3D4 273 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Cyp2f2P33267 491 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Ptpn11P35235 597 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Mxi1P50540 228 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Btg3P50615 252 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Pnpla5Q32LZ8 432 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Rnf10Q3UIW5 804 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Cyp2j11Q3UNV2 504 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Rcsd1Q3UZA1 412 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Slain1Q68FF7 579 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Gucy2gQ6TL19 1100 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Zswim6Q80TB7 1207 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Suz12Q80U70 741 aaKnown RBP14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Eif4bQ8BGD9 611 aaKnown RBP14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Dupd1Q8BK84 215 aa14.09□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms