RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Kcnt1Q6ZPR4 1224 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 UvragQ8K245 698 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Trpm8Q8R4D5 1104 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Znf687Q9D2D7 1237 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Serpinb3cA2RSF9 386 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Drp2Q05AA6 957 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Akap7Q7TN79 314 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Serpinb10Q8K1K6 397 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Il31raQ8K5B1 716 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Slc2a5Q9WV38 501 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tll2Q9WVM6 1012 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Bub1bQ9Z1S0 1052 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 GsnP13020 780 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Klra1P20937 262 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ttc39dQ0VF76 604 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Nlrp14Q6B966 993 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rnaseh2bQ80ZV0 308 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Kat5Q8CHK4 513 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 IscuQ9D7P6 168 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 EloblA6PWE0 161 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 EsrraO08580 422 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 PhexP70669 749 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ndufaf2Q59J78 168 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Brip1Q5SXJ3 1174 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Znf148Q61624 794 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 FtoQ8BGW1 502 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Btnl9Q8BJE2 536 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Nop9Q8BMC4 636 aaKnown RBP16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Trim32Q8CH72 655 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ngly1Q9JI78 651 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Mxi1P50540 228 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Neurl1bQ0MW30 546 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Leg1Q8C6C9 337 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Cwf19l1Q8CI33 537 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Vmn1r218Q8R261 298 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ces1fQ91WU0 561 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ugp2Q91ZJ5 508 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ap2b1Q9DBG3 937 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Anxa9Q9JHQ0 345 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ptf1aQ9QX98 324 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Scgb2b7D3YYY1 112 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gnrh1P13562 90 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Mkrn3Q60764 544 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fam49bQ921M7 324 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Soat2O88908 525 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gm13103Q4VAD2 491 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tor1aip2Q8BYU6 502 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 BlvraQ9CY64 295 aa16.31■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 InscQ3HNM7 579 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Srek1ip1Q4V9W2 153 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Wdr35Q8BND3 1181 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Arfip2Q8K221 341 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Afg3l1Q920A7 789 aaKnown RBP16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Limd1Q9QXD8 668 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Cpsf3Q9QXK7 684 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fut8Q9WTS2 575 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rfx8D3YU81 596 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Hnrnph3D3Z3N4 346 aaKnown RBP16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fcer2P20693 331 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Pde6bP23440 856 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Zbtb5Q7TQG0 670 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Aldh5a1Q8BWF0 523 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Uba3Q8C878 462 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Lrrc57Q9D1G5 239 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Mettl1Q9Z120 268 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Aknad1E9Q8N6 675 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 E230025N22RikG5E8S3 482 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 PklrP53657 574 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Pfdn4Q3UWL8 134 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 AopepQ8BXQ6 817 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Znf445Q8R2V3 986 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Lpin2Q99PI5 893 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Scn7aB1AYL1 1681 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Znf746Q3U133 652 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gucy2gQ6TL19 1100 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Pcdha11Q91Y19 950 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Trpv2Q9WTR1 756 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Heg1E9Q7X6 1337 aa16.3■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Supt3B0QZW4 406 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 PtenO08586 403 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Itgb5O70309 798 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Hspa9P38647 679 aaKnown RBP16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Atoh1P48985 351 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ppp3caP63328 521 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Zfp90Q61967 636 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 SnphQ80U23 495 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tcaf1Q8BNE1 924 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Mill1Q8HWE7 395 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Polr3cQ9D483 533 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Usp29Q9ES63 869 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Vmn2r77L7N2B7 854 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 CcnoP0C242 352 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gngt2Q61017 69 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Lyve1Q8BHC0 318 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 DcakdQ8BHC4 231 aaKnown RBP16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gm11983V9GXS8 105 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Vmn2r63E9Q0K5 859 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gm9268E9Q0M3 861 aa16.29■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Vmn2r62K7N712 859 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 73.6 ms