RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 PimregQ8BFY7 231 aa12.13□□□□□ -0.47
Vps54-202ENSMUST00000109578 Angel1Q8VCU0 667 aa12.13□□□□□ -0.47
Vps54-202ENSMUST00000109578 Arhgef10lA2AWP8 1280 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Klrk1O54709 232 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Atp2a2O55143 1044 aaKnown RBP12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 PdgfraP26618 1089 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Cav1P49817 178 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ect2Q07139 913 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Zbtb14Q08376 449 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Sh3rf1Q69ZI1 892 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Rell1Q8K2J7 272 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ttc8Q8VD72 515 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 MgarpQ8VI64 283 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Pcdha10Q91Y20 946 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Q9CYI0 393 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ly75Q60767 1723 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Rpl21O09167 160 aaKnown RBP12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Phka1P18826 1241 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 PrkchP23298 683 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Hsd17b2P51658 381 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Epas1P97481 874 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Pde1bQ01065 535 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 GsapQ3TCV3 858 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ifnl2Q4VK74 193 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 DeptorQ570Y9 409 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Klhdc10Q6PAR0 439 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Dupd1Q8BK84 215 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Plekhh3Q8VCE9 796 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Nt5c1bQ91YE9 573 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 XkQ9QXY7 446 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 SufuQ9Z0P7 484 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Cdr2lA2A6T1 465 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Skint3A7TZF0 458 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Unc5cO08747 931 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Cyp2j11Q3UNV2 504 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Abi3bpQ59IW6 1179 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ppp1r13lQ5I1X5 824 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Snx19Q6P4T1 997 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Dclre1bQ8C7W7 541 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 NelfcdQ922L6 591 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Pcsk1nQ9QXV0 258 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Arih1Q9Z1K5 555 aa12.12□□□□□ -0.47
Vps54-202ENSMUST00000109578 Zscan4-ps1A0A1C7CYV3 506 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Zscan4dA7KBS4 506 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 GnazO70443 355 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Stra6O70491 670 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Zscan4fQ3URS2 506 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Tdpoz2Q717B2 364 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Dzip3Q7TPV2 1204 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Zscan4cQ80VJ6 506 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Znf879Q8BI99 563 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Hectd2Q8CDU6 774 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Usp26Q99MX1 835 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Cyp39a1Q9JKJ9 470 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Uts2Q9QZQ3 123 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Zfp612A0A1D5RMC2 672 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Itpripl1A2ASA8 547 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Lipo2D3YY49 398 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Gm4841E9QAA8 417 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Dusp8O09112 663 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Pde6bP23440 856 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Cap1P40124 474 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Myl6Q60605 151 aaKnown RBP12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Gbp4Q61107 620 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Il33Q8BVZ5 266 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 OlahQ8R197 265 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Lars2Q8VDC0 902 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Chchd3Q9CRB9 227 aaKnown RBP12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 PnkpQ9JLV6 522 aaKnown RBP12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Sbf2E9PXF8 1872 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Nt5dc3Q3UHB1 546 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Lipo3Q3UT41 399 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 RilpQ5ND29 369 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Znf507Q6ZPY5 941 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Wdtc1Q80ZK9 677 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Man2a2Q8BRK9 1152 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Azin2Q8BVM4 459 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Slc39a13Q8BZH0 361 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Foxp3Q99JB6 429 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Slc39a3Q99K24 317 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Nsmce1Q9D720 266 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Rsc1a1Q9ER99 582 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Psme4Q5SSW2 1843 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Pgap3A2A559 320 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Gm6588E9Q3K0 461 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 DffaO54786 331 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Aoc3O70423 765 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Aimp1P31230 310 aaKnown RBP12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Pak4Q8BTW9 593 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Thap12Q9CUX1 758 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Med10Q9CXU0 135 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 DpysQ9EQF5 519 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Nphs1Q9QZS7 1256 aa12.11□□□□□ -0.47
Vps54-202ENSMUST00000109578 Gm9774A0A0A6YVU8 407 aa12.1□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ttc17E9PVB5 1198 aa12.1□□□□□ -0.47
Vps54-202ENSMUST00000109578 VdrP48281 422 aa12.1□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ccdc138Q0VF22 680 aa12.1□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ugt3a1Q3UP75 523 aa12.1□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ssxb5Q6XAS2 159 aa12.1□□□□□ -0.47
Vps54-202ENSMUST00000109578 Ush1gQ80T11 461 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms