RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Paxbp1P58501 919 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Pou6f1Q07916 301 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Samd11Q1RNF8 542 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Ccdc33Q3ULW6 985 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Stip1Q60864 543 aaKnown RBP20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Tdpoz2Q717B2 364 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Snip1Q8BIZ6 383 aaKnown RBP20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Pum3Q8BKS9 647 aaKnown RBP20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Gjc2Q8BQU6 440 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 PisdQ8BSF4 406 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Commd10Q8JZY2 202 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Plekhh3Q8VCE9 796 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Cfap57Q9D180 1249 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Ttc3O88196 1979 aaKnown RBP20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Impa1O55023 277 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Nr3c1P06537 783 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Rhox5P52651 210 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 LipeP54310 759 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 DsppP97399 934 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Smyd1P97443 490 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Sox8Q04886 464 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Znf367Q0VDT2 340 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Nxf2Q4ZGD8 691 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Usp17laQ61068 526 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Lsm8Q6ZWM4 96 aaKnown RBP20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Lrrc66Q8K0B3 872 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Vwa1Q8R2Z5 415 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 Eml3Q8VC03 897 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 EpgnQ924X1 152 aa20.46■□□□□ 0.87
Ttc39a-203ENSMUST00000106619 1700001O22RikA2APZ1 375 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 ZxdbA2CE44 873 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Lrrc4bP0C192 709 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 NsfP46460 744 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Rnf19aP50636 840 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Rplp2P99027 115 aaKnown RBP20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Nlrc4Q3UP24 1024 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Esyt3Q5DTI8 891 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Trim25Q61510 634 aaKnown RBP20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Zfyve28Q6ZPK7 905 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Daam2Q80U19 1115 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Inpp5fQ8CDA1 1132 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Med7Q9CZB6 233 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Mkrn2Q9ERV1 416 aaKnown RBP20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Cacng4Q9JJV4 327 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Pdzd4Q9QY39 772 aa20.45■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Akap17bA2A3V1 959 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Gm8369E9PZI3 166 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Cyp2b23E9Q593 491 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Top6blJ3QMY9 579 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Dpysl4O35098 572 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Trim30aP15533 496 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 UrosP51163 265 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 ArvcfP98203 962 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Znf800Q0VEE6 662 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Cul4aQ3TCH7 759 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Arhgap11aQ80Y19 987 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Mical2Q8BML1 960 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Brat1Q8C3R1 822 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Phc3Q8CHP6 981 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Gm281D3Z1Y0 860 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Cdc6O89033 562 aaKnown RBP20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 P01650 108 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 P01653 108 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Aldh1a1P24549 501 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Eef1dP57776 281 aaKnown RBP20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Fads2p1Q0VAX3 487 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Parp3Q3ULW8 533 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Kiaa1841Q68FF0 718 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Gpr156Q6PCP7 798 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Olfr670Q7TRP3 312 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Slc2a12Q8BFW9 622 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Ppfibp1Q8C8U0 969 aaKnown RBP20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Castor2Q8CAB8 329 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Serpina10Q8R121 448 aa20.44■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Obsl1D3YYU8 1804 aaKnown RBP20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 1700031M16RikA0A087WSH0 82 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Vmn2r77L7N2B7 854 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Cpsf2O35218 782 aaKnown RBP20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Ifnb1P01575 182 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Lhx5P61375 402 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Tmprss15P97435 1069 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Vps51Q3UVL4 782 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Papd7Q6PB75 542 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Vat1lQ80TB8 417 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Slc9a7Q8BLV3 726 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Prl7b1Q8CGZ9 251 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 LgsnQ8CIX8 563 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 D630039A03RikQ8K0M7 236 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Pcdhgb4Q91XX6 912 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Gtf2ird1Q9JI57 1104 aaKnown RBP20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Nr1h3Q9Z0Y9 445 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Arhgef10Q8C033 1345 aa20.43■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Casp8ap2Q9WUF3 1962 aa20.42■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Fam71aB7XG49 585 aa20.42■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Gm2030D3Z7C4 212 aa20.42■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Snx12O70493 165 aa20.42■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Gpr25P0C5I1 358 aa20.42■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Mybl1P51960 751 aa20.42■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Flt3Q00342 1000 aa20.42■□□□□ 0.86
Ttc39a-203ENSMUST00000106619 Ect2Q07139 913 aa20.42■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms