RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Vti1aO89116 217 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Lmo2P25801 158 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ctnnd1P30999 938 aaKnown RBP10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ercc5P35689 1170 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 YwhaeP62259 255 aaKnown RBP10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rad54lP70270 747 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Usp17laQ61068 526 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Hspa4Q61316 841 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ddx3xQ62167 662 aaKnown RBP10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Nop9Q8BMC4 636 aaKnown RBP10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 LgsnQ8CIX8 563 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Colgalt1Q8K297 617 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ttc1Q91Z38 292 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Spatc1lQ9D9W0 342 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Uchl3Q9JKB1 230 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pdzd4Q9QY39 772 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Dennd5bA2RSQ0 1274 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm4297D3YWB7 211 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pbx2O35984 430 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Tspyl1O88852 379 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rrm1P07742 792 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rad23aP54726 363 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Eef1dP57776 281 aaKnown RBP10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Paxbp1P58501 919 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Nek10Q3UGM2 1111 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cyfip2Q5SQX6 1253 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Arhgap11aQ80Y19 987 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Wdr3Q8BHB4 942 aaKnown RBP10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Fam43aQ8BUP8 424 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cyp2d26Q8CIM7 500 aa10.58□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ighv11-2A0A075B5R8 117 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 BC025446A0A087WQT1 134 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Sec14l1A8Y5H7 715 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Grik3B1AS29 919 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 XntrpcF8VQM8 1264 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ube3aO08759 870 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cdk14O35495 469 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ptgs2Q05769 604 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Fam92bQ3V2J0 292 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pabpc4Q6PHQ9 660 aaKnown RBP10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Nod1Q8BHB0 953 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ppp2r2dQ925E7 453 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Map4k3Q99JP0 894 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 MutyhQ99P21 515 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rab11fip1Q9D620 645 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Vmn1r65Q9EPS7 332 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Scgb2b11A0A087WR49 112 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm13941A2AJ38 245 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Scgb2b19J3QM75 112 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Abcb1bP06795 1276 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 H2afzP0C0S6 128 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cdk4P30285 303 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Stat4P42228 749 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 ArvcfP98203 962 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 H2afvQ3THW5 128 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gse1Q3U3C9 1213 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 FdxrQ61578 494 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Crtc1Q68ED7 630 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Paxip1Q6NZQ4 1056 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ttc39bQ8BYY4 617 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Zdhhc3Q8R173 299 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Etv3Q8R4Z4 513 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ctnnbl1Q9CWL8 563 aaKnown RBP10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 PirQ9D711 290 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Tmem86aQ9D8N3 241 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Adgrf5G5E8Q8 1348 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Rnf113a2Q14B01 337 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Ppp4r3cQ3V0Y1 813 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Mxd4Q60948 209 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Haus1Q8BHX1 278 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Crlf2Q8CII9 359 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Themis2Q91YX0 663 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cox16Q9CR63 106 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Golph3Q9CRA5 298 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Bbs5Q9CZQ9 341 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Cntnap4Q99P47 1310 aa10.57□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Hnrnph3D3Z3N4 346 aaKnown RBP10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 R3hdm1E9Q9Q2 1135 aaKnown RBP10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Tsta3P23591 321 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pth1rP41593 591 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 NsfP46460 744 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Il1rapl1P59823 695 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 DmwdQ08274 665 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Zbtb17Q60821 794 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Fmnl3Q6ZPF4 1028 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Akap7Q7TN79 314 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Vcpip1Q8CDG3 1220 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Eif3cQ8R1B4 911 aaKnown RBP10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Asb11Q9CQ31 323 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 1700123K08RikQ9D991 295 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Nlrc5C3VPR6 1915 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gm13276A0A087WR18 182 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 EloblA6PWE0 161 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Slc12a1P55014 1095 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pafah1b1P63005 410 aaKnown RBP10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Pde1cQ64338 706 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Zdhhc19Q810M5 347 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Gjc2Q8BQU6 440 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Brat1Q8C3R1 822 aa10.56□□□□□ -0.72
Ccdc38-201ENSMUST00000092215 Q8CD60 292 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms