RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Ncoa7Q6DFV7 943 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 G6pc3Q6NSQ9 346 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Smpd4Q6ZPR5 823 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 E330021D16RikQ8BW45 371 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Acad9Q8JZN5 625 aaKnown RBP8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Scnm1Q8K136 229 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Olfr1495Q8VEZ4 319 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Prdm9Q96EQ9 843 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Jag1Q9QXX0 1218 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Padi4Q9Z183 666 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 FocadA2AKG8 1798 aa8.4□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Ly75Q60767 1723 aa8.4□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Olfr1032A2ATE5 310 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Ttc7bE9Q6P5 843 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Ext2P70428 718 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gucy2cQ3UWA6 1072 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sfi1Q3UZY0 1216 aaKnown RBP8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Msl2Q69ZF8 577 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 KhnynQ80U38 671 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Galnt7Q80VA0 657 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Spats2Q8K1N4 545 aaKnown RBP8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 StrbpQ91WM1 672 aaKnown RBP8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 AmnQ99JB7 458 aaKnown RBP8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Anks3Q9CZK6 655 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Rin2Q9D684 903 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Mgea5Q9EQQ9 916 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Wdr12Q9JJA4 423 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 PigbQ9JJQ0 542 aa8.39□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 CemipQ8BI06 1361 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 TnrQ8BYI9 1358 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Arhgap40E9Q6X9 672 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Myf5P24699 255 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Hoxd13P70217 339 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Erbb2P70424 1256 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Atp2b3Q0VF55 1220 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Serinc4Q5XK03 492 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Aggf1Q7TN31 711 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Phactr3Q8BYK5 558 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 AcppQ8CE08 381 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Scrn2Q8VCA8 425 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Cavin3Q91VJ2 260 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Pqbp1Q91VJ5 263 aaKnown RBP8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Tdrd3Q91W18 743 aaKnown RBP8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Kcnh5Q920E3 988 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Loxl4Q924C6 757 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Mrm1Q99J25 320 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Cdc7Q9Z0H0 564 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sfrp4Q9Z1N6 351 aa8.38□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Pgap3A2A559 320 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Tpp1O89023 562 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 CfhP06909 1234 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Dpy19l2P0CW70 773 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Ms4a1P19437 291 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gstm3P19639 218 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Cbx2P30658 519 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gpc4P51655 557 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Pla2g5P97391 137 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 UngP97931 306 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Wdr36Q3TAQ9 899 aaKnown RBP8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Arhgap17Q3UIA2 846 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sf3b2Q3UJB0 878 aaKnown RBP8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Ppp4r3cQ3V0Y1 813 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sin3aQ60520 1274 aaKnown RBP8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 MertkQ60805 994 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 RubcnQ80U62 956 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Pramel6Q810Y9 485 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Slc17a6Q8BLE7 582 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 ReltQ8BX43 436 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Chpt1Q8C025 398 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Lmbrd1Q8K0B2 537 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gimap7Q8R379 293 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 RnpepQ8VCT3 650 aaKnown RBP8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Rapgef4Q9EQZ6 1011 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Slc13a1Q9JHI4 594 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Letm1Q9Z2I0 738 aa8.37□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Syngap1F6SEU4 1340 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gm7168A0AUV4 508 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Las1lA2BE28 776 aaKnown RBP8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Lonrf1D3YY23 762 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sgo2bJ3QMK1 1167 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Ccng2O08918 344 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Eef1bO70251 225 aaKnown RBP8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Rap2bP61226 183 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 EvlP70429 414 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Tmed8Q3UHI4 326 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gm14851Q5ERJ0 116 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Rbm38Q62176 237 aaKnown RBP8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Rbm12b2Q66JV4 834 aaKnown RBP8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Tnpo1Q8BFY9 898 aaKnown RBP8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Fam69cQ8BQT2 410 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Ankk1Q8BZ25 745 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Olfr351Q8VGK1 310 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 GcshQ91WK5 170 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Pcdhb8Q91XZ2 779 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 AvenQ9D9K3 342 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sp5Q9JHX2 398 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Nwd2Q6P5U7 1742 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 FancaQ9JL70 1439 aa8.36□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 PrxO55103 1391 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Nup153E9Q3G8 1462 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms