RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pcyox1Q9CQF9 505 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gstt4Q9D4P7 240 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 PirQ9D711 290 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 IscuQ9D7P6 168 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cables1Q9ESJ1 568 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Krt17Q9QWL7 433 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fbxo17Q9QZM8 286 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 HttP42859 3119 aa9.26□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm28919A0A087WP35 240 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm4756A0A140LIS8 335 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ttc17E9PVB5 1198 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Trim30bE9PVL6 203 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm4302E9PX25 294 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Vmn2r17E9PYF5 849 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm3739L7N296 216 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ctnnd1P30999 938 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Uchl4P58321 233 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Smpd1Q04519 627 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Sh3bp2Q06649 559 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Znhit6Q3UFB2 460 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ndst1Q3UHN9 882 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 CochQ62507 552 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Arhgap10Q6Y5D8 786 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 SpopQ6ZWS8 374 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tdpoz2Q717B2 364 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tas2r125Q7M710 311 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ccdc15Q8C9M2 810 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tph2Q8CGV2 488 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tmprss4Q8VCA5 435 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 GhdcQ99J23 532 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rnf14Q9JI90 485 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Nup50Q9JIH2 466 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Map2k5Q9WVS7 448 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Akap17bA2A3V1 959 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Olfr1354E9Q5G9 310 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Actn3O88990 900 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 XlrP05531 208 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Pcbp1P60335 356 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 YwhaeP62259 255 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Top1Q04750 767 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gpr15Q0VDU3 360 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 LbrQ3U9G9 626 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 OgdhQ60597 1023 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rnf168Q80XJ2 565 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Pum3Q8BKS9 647 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 A430089I19RikQ8C9W1 407 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dmtf1Q8CE22 761 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rftn2Q8CHX7 500 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Clstn3Q99JH7 956 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Fuca1Q99LJ1 452 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Rnf25Q9QZR0 456 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Mindy4b-psA0A1W2P7H6 457 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm27029A2A4P4 543 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Hsd17b14E9Q3D4 273 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm6583E9Q8Z1 469 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Gm1758F6VZZ1 202 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Myl1P05977 188 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 ZfxP17012 799 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ptpn11P35235 597 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Psmc1P62192 440 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ttc39dQ0VF76 604 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ccdc125Q5U465 500 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Kiaa1328Q6NZK5 612 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 TxlnaQ6PAM1 554 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Papd7Q6PB75 542 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ssxb10Q6XAR7 170 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tmem145Q8C4U2 746 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Prl7b1Q8CGZ9 251 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Wdr11Q8K1X1 1223 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Socs4Q91ZA6 436 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 DarsQ922B2 501 aaKnown RBP9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Micu3Q9CTY5 523 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 B4galt4Q9JJ04 344 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ripk3Q9QZL0 486 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Casp8ap2Q9WUF3 1962 aa9.25□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cep350E9Q309 3095 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 CaluO35887 315 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Lmo2P25801 158 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ighmbp2P40694 993 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dlg3P70175 849 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Odr4Q4PJX1 447 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cct8l1Q80YT3 562 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Metap1Q8BP48 386 aaKnown RBP9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Lrrc66Q8K0B3 872 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Kctd15Q8K0E1 283 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tada3Q8R0L9 432 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Trpv6Q91WD2 767 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dnajc14Q921R4 703 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Cyp39a1Q9JKJ9 470 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Igkv10-96A0A140T8M1 115 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Pja1O55176 578 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Tmprss15P97435 1069 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Plk1Q07832 603 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Trim43aQ3TL54 445 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Smyd5Q3TYX3 416 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Nek10Q3UGM2 1111 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Dab2ipQ3UHC7 1189 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Ccdc33Q3ULW6 985 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Vps51Q3UVL4 782 aa9.24□□□□□ -0.93
Trim39-201ENSMUST00000042717 Bbof1Q3V079 533 aa9.24□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms