RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Kiaa0391Q8JZY4 584 aaKnown RBP14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Trim59Q922Y2 403 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dusp10Q9ESS0 483 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Orc6Q9WUJ8 262 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cdk12Q14AX6 1484 aaKnown RBP14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Trappc11B2RXC1 1133 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Guca1aP43081 202 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Man1a1P45700 655 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ica1lQ3TY65 431 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Slc9a1Q61165 820 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 HadhQ61425 314 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nlrp9cQ66X01 1004 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Q6GQU0 248 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmc4Q7TQ65 694 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Usp1Q8BJQ2 784 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 UvragQ8K245 698 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cyp2c50Q91X77 490 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Stk33Q924X7 491 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Q99LU8 229 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Adck1Q9D0L4 525 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rims1Q99NE5 1463 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Trim43bP86448 445 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tlr11Q6R5P0 926 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pum3Q8BKS9 647 aaKnown RBP14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tmtc3Q8BRH0 920 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Sik2Q8CFH6 931 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nrif2Q921B4 824 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cep97Q9CZ62 856 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Sfmbt1Q9JMD1 863 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gsta3P30115 221 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Idi1P58044 227 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 S100a13P97352 98 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Efr3aQ8BG67 819 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Defb15Q8R2I5 79 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Dnajc12Q9R022 198 aa14.54□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PuraP42669 321 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fam92bQ3V2J0 292 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tdpoz2Q717B2 364 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 PolnQ7TQ07 864 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pdia6Q922R8 440 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 TpbpbQ9CQC0 121 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Arhgef25Q9CWR0 618 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 CygbQ9CX80 190 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Sgsm1Q8BPQ7 1093 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rft1Q8C3B8 541 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Pcdha11Q91Y19 950 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Stk32bQ9JJX8 414 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Asap1Q9QWY8 1147 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Patl2A2ARM1 529 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fam71dD3YV92 440 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Mgat1P27808 447 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rbm15bQ6PHZ5 887 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 GaleQ8R059 347 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Fam32aQ9CR80 112 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Trp53inp1Q9QXE4 239 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nr1h3Q9Z0Y9 445 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Med14A2ABV5 1459 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm17093F6XGJ4 214 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Aff1O88573 1216 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ptpn5P54830 541 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 IgfalsP70389 603 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cct3P80318 545 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tex11Q14AT2 947 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Adam2Q60718 735 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Kcna4Q61423 654 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Slxl1Q9D515 155 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cyp39a1Q9JKJ9 470 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ap4s1Q9WVL1 144 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Apoa4P06728 395 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Usp53P15975 1069 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Vamp7P70280 220 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ceacam5Q3UKK2 947 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Spata21Q8BHW6 681 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Stx5Q8K1E0 355 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tesk2Q8VCT9 570 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 EtfbQ9DCW4 255 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Spag6Q9JLI7 507 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Gm13023A2A8N2 498 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rexo5D3YW29 759 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Ireb2Q811J3 963 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 H2afyQ9QZQ8 372 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 RerglB2RVE2 204 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Farp1F8VPU2 1048 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nek2O35942 443 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rab6bP61294 208 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Rps7P62082 194 aaKnown RBP14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Grid1Q61627 1009 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Olfr301Q7TS04 311 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 TbcelQ8C5W3 424 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Nlrp4bQ8C6J9 863 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Actl9Q8CG27 415 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Spag16Q8K450 639 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tceal3Q8R0A5 200 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Znf426Q8R1D1 550 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Tex13bQ99MW5 186 aa14.53□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Cdc42bpgQ80UW5 1551 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Chn1Q91V57 459 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Wdr12Q9JJA4 423 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 Thap11Q9JJD0 305 aa14.52□□□□□ -0.08
Col5a1-201ENSMUST00000028280 WapP01173 134 aa14.52□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms