RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	PAU2	P32612	120 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	RAD23	P32628	398 aa	Known RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	SKN1	P33336	771 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	THI80	P35202	319 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	MRPL16	P38064	232 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	THI2	P38141	450 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	RPL14B	P38754	138 aa	Known RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	TRR2	P38816	342 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	YAL037W	P39728	267 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	DLS1	P40366	167 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	TES1	P41903	349 aa	Known RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	TTI2	P47168	421 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	COQ5	P49017	307 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	BOL2	P53082	120 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	ERG26	P53199	349 aa	Known RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	BIO5	P53744	561 aa	Known RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	APS2	Q00381	147 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	SKO1	Q02100	647 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	THI74	Q04083	370 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	HNT1	Q04344	158 aa	Known RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	MRPL1	Q04599	285 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	YMR252C	Q04814	134 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	RSF1	Q05043	376 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	YTH1	Q06102	208 aa	Predicted RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	YPR174C	Q06616	221 aa	Predicted RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	RRT7	Q07829	113 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	YPL162C	Q12042	273 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	MCP1	Q12106	302 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	YLR050C	Q12155	161 aa	Known RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	TFB5	Q3E7C1	72 aa	Predicted RBP	2.34	□□□□□ -2.03
LCL1	YPL056C	Q0010	Q9ZZX9	128 aa		2.34	□□□□□ -2.03
LCL1	YPL056C	CCH1	P50077	2039 aa		2.34	□□□□□ -2.04
LCL1	YPL056C	CYC3	P06182	269 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	INO4	P13902	151 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	DPM1	P14020	267 aa	Known RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	MCK1	P21965	375 aa	Known RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	IDH2	P28241	369 aa	Known RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	TRR1	P29509	319 aa	Known RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	ERG24	P32462	438 aa	Known RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	MKK2	P32491	506 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	DUT1	P33317	147 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	PPZ2	P33329	710 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	PRP18	P33411	251 aa	Predicted RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	YKL071W	P36086	256 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	DRE2	P36152	348 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	MRPL27	P36526	146 aa	Predicted RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	CBP4	P37267	147 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	MRP21	P38175	177 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YBR071W	P38243	211 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	SLM6	P38343	150 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	FYV4	P38783	130 aa	Predicted RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	HSP10	P38910	106 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	OXA1	P39952	402 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YER076C	P40049	302 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	GPP2	P40106	250 aa	Known RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	YIL165C	P40446	119 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	MSL1	P40567	111 aa	Predicted RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	MEP2	P41948	499 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YFL065C	P43539	102 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	SFH5	P47008	294 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	UBX6	P47049	396 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YJL028W	P47062	111 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YGL230C	P53074	147 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	MTM1	P53320	366 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	DUG3	P53871	357 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YLR460C	P54007	376 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	UBC7	Q02159	165 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YML083C	Q04526	418 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	ARR3	Q06598	404 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	STP4	Q07351	490 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	PAM18	Q07914	168 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	LDS2	Q08218	356 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YPR203W	Q08994	102 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	MRH1	Q12117	320 aa	Predicted RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	FCY22	Q12119	530 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	RPL7B	Q12213	244 aa	Known RBP	2.33	□□□□□ -2.04
LCL1	YPL056C	MCT1	Q12283	360 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	ICT1	Q12385	394 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	PCL9	Q12477	304 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	ZPS1	Q12512	249 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	YLR146W-A	Q2V2P1	62 aa		2.33	□□□□□ -2.04
LCL1	YPL056C	SOD2	P00447	233 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	DED1	P06634	604 aa	Known RBP	2.32	□□□□□ -2.04
LCL1	YPL056C	STE7	P06784	515 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	COX9	P07255	59 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	YER039C-A	P0CD97	72 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	YKR104W	P0CE69	306 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	SEC11	P15367	167 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	SLY41	P22215	453 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	MAK32	P23060	363 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	PCL1	P24867	279 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	YJU3	P28321	313 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	TOA2	P32774	122 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	TKL2	P33315	681 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	GEX2	P36173	615 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	MIC12	P38341	106 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	YBR292C	P38357	123 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	BAT1	P38891	393 aa	Known RBP	2.32	□□□□□ -2.04
LCL1	YPL056C	UME6	P39001	836 aa		2.32	□□□□□ -2.04
LCL1	YPL056C	YEA4	P40004	342 aa		2.32	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms