RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YKL075CP36083 450 aa8.34□□□□□ -1.08
SSN3YPL042C YJL218WP40892 196 aaKnown RBP8.34□□□□□ -1.08
SSN3YPL042C BRR6P53062 197 aa8.34□□□□□ -1.08
SSN3YPL042C MKC7P53379 596 aa8.34□□□□□ -1.08
SSN3YPL042C CPR8P53728 308 aa8.34□□□□□ -1.08
SSN3YPL042C SUR7P54003 302 aa8.34□□□□□ -1.08
SSN3YPL042C DAD3P69850 94 aa8.34□□□□□ -1.08
SSN3YPL042C STP4Q07351 490 aa8.34□□□□□ -1.08
SSN3YPL042C POM34Q12445 299 aa8.34□□□□□ -1.08
SSN3YPL042C YCR075W-AQ3E830 75 aa8.34□□□□□ -1.08
SSN3YPL042C TIR2P33890 251 aa8.33□□□□□ -1.08
SSN3YPL042C YEA6P39953 335 aa8.33□□□□□ -1.08
SSN3YPL042C MIC26P50087 233 aa8.33□□□□□ -1.08
SSN3YPL042C YIP1P53039 248 aa8.33□□□□□ -1.08
SSN3YPL042C FRE8Q12209 686 aa8.33□□□□□ -1.08
SSN3YPL042C YCT1Q12235 531 aa8.33□□□□□ -1.08
SSN3YPL042C YFR010W-AP0C5N0 62 aa8.32□□□□□ -1.08
SSN3YPL042C POF1P25576 258 aa8.32□□□□□ -1.08
SSN3YPL042C YCR102CP25608 368 aa8.32□□□□□ -1.08
SSN3YPL042C TAX4P47030 604 aa8.32□□□□□ -1.08
SSN3YPL042C YJR015WP47090 510 aa8.32□□□□□ -1.08
SSN3YPL042C RAV2Q03956 351 aa8.32□□□□□ -1.08
SSN3YPL042C ARC18Q05933 178 aaKnown RBP8.32□□□□□ -1.08
SSN3YPL042C TAZ1Q06510 381 aa8.32□□□□□ -1.08
SSN3YPL042C AIM45Q12480 344 aaKnown RBP8.32□□□□□ -1.08
SSN3YPL042C RPN13O13563 156 aa8.31□□□□□ -1.08
SSN3YPL042C REP2P03872 296 aa8.31□□□□□ -1.08
SSN3YPL042C ADK1P07170 222 aaKnown RBP8.31□□□□□ -1.08
SSN3YPL042C RPL31AP0C2H8 113 aaKnown RBP8.31□□□□□ -1.08
SSN3YPL042C RPL31BP0C2H9 113 aaKnown RBP8.31□□□□□ -1.08
SSN3YPL042C LDS1P31379 325 aa8.31□□□□□ -1.08
SSN3YPL042C PUB1P32588 453 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08 RIP-Chip
SSN3YPL042C YIL165CP40446 119 aa8.31□□□□□ -1.08
SSN3YPL042C CAC2Q04199 468 aa8.31□□□□□ -1.08
SSN3YPL042C YMR320WQ04897 101 aa8.31□□□□□ -1.08
SSN3YPL042C HRT1Q08273 121 aa8.31□□□□□ -1.08
SSN3YPL042C ALG6Q12001 544 aaKnown RBP8.31□□□□□ -1.08
SSN3YPL042C ATP14Q12349 124 aa8.31□□□□□ -1.08
SSN3YPL042C GLT1Q12680 2145 aaKnown RBP8.31□□□□□ -1.08
SSN3YPL042C GRX2P17695 143 aaKnown RBP8.3□□□□□ -1.08
SSN3YPL042C FEN2P25621 512 aaKnown RBP8.3□□□□□ -1.08
SSN3YPL042C POP5P28005 173 aa8.3□□□□□ -1.08
SSN3YPL042C NAB2P32505 525 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
SSN3YPL042C YBR063CP38083 404 aa8.3□□□□□ -1.08
SSN3YPL042C ERV15P38312 142 aa8.3□□□□□ -1.08
SSN3YPL042C AIM6Q07716 390 aa8.3□□□□□ -1.08
SSN3YPL042C RRG7Q08774 242 aaPredicted RBP8.3□□□□□ -1.08
SSN3YPL042C TY1A-NL1Q12391 440 aaKnown RBP8.3□□□□□ -1.08
SSN3YPL042C YEL009C-AA0A023PZF2 135 aa8.3□□□□□ -1.08
SSN3YPL042C YBR085C-AO43137 85 aa8.3□□□□□ -1.08
SSN3YPL042C FUN19P28003 413 aaPredicted RBP8.3□□□□□ -1.08
SSN3YPL042C YKR073CP36153 106 aa8.3□□□□□ -1.08
SSN3YPL042C DOG1P38774 246 aa8.3□□□□□ -1.08
SSN3YPL042C SNU13P39990 126 aaKnown RBP8.3□□□□□ -1.08
SSN3YPL042C GLE2P40066 365 aa8.3□□□□□ -1.08
SSN3YPL042C SOK2P53438 785 aaPredicted RBP8.3□□□□□ -1.08
SSN3YPL042C HHO1P53551 258 aa8.3□□□□□ -1.08
SSN3YPL042C CNL1Q06333 122 aa8.3□□□□□ -1.08
SSN3YPL042C IRC19Q07843 230 aa8.3□□□□□ -1.08
SSN3YPL042C YOR343CQ12484 108 aa8.3□□□□□ -1.08
SSN3YPL042C YOR032W-AQ8TGS1 66 aa8.3□□□□□ -1.08
SSN3YPL042C PEP4P07267 405 aaKnown RBP8.29□□□□□ -1.08
SSN3YPL042C YER039C-AP0CD97 72 aa8.29□□□□□ -1.08
SSN3YPL042C GAS1P22146 559 aaKnown RBP8.29□□□□□ -1.08
SSN3YPL042C PGU1P47180 361 aa8.29□□□□□ -1.08
SSN3YPL042C LST7P53237 242 aa8.29□□□□□ -1.08
SSN3YPL042C PAU12P53343 120 aa8.29□□□□□ -1.08
SSN3YPL042C ELC1Q03071 99 aa8.29□□□□□ -1.08
SSN3YPL042C YDR209CQ03480 137 aa8.29□□□□□ -1.08
SSN3YPL042C TDA1Q03533 586 aa8.29□□□□□ -1.08
SSN3YPL042C NUP53Q03790 475 aa8.29□□□□□ -1.08
SSN3YPL042C SIR2P06700 562 aa8.28□□□□□ -1.08
SSN3YPL042C YML003WP0CF16 290 aa8.28□□□□□ -1.08
SSN3YPL042C RTG1P32607 177 aa8.28□□□□□ -1.08
SSN3YPL042C PPZ2P33329 710 aa8.28□□□□□ -1.08
SSN3YPL042C NTF2P33331 125 aaKnown RBP8.28□□□□□ -1.08
SSN3YPL042C YNK1P36010 153 aaKnown RBP8.28□□□□□ -1.08
SSN3YPL042C QDR3P38227 689 aa8.28□□□□□ -1.08
SSN3YPL042C OM14P38325 134 aa8.28□□□□□ -1.08
SSN3YPL042C YGP1P38616 354 aaKnown RBP8.28□□□□□ -1.08
SSN3YPL042C GLR1P41921 483 aaKnown RBP8.28□□□□□ -1.08
SSN3YPL042C RSM10Q03201 203 aa8.28□□□□□ -1.08
SSN3YPL042C COQ3P27680 312 aa8.27□□□□□ -1.08
SSN3YPL042C SNC2P33328 115 aa8.27□□□□□ -1.08
SSN3YPL042C ZRT3P34240 503 aa8.27□□□□□ -1.08
SSN3YPL042C PAU24P38155 120 aa8.27□□□□□ -1.08
SSN3YPL042C YMR144WP40214 342 aaKnown RBP8.27□□□□□ -1.08
SSN3YPL042C SCS7Q03529 384 aa8.27□□□□□ -1.08
SSN3YPL042C RDL1Q12305 139 aaKnown RBP8.27□□□□□ -1.08
SSN3YPL042C RPL9AP05738 191 aaKnown RBP8.27□□□□□ -1.09
SSN3YPL042C RPL11AP0C0W9 174 aaKnown RBP8.27□□□□□ -1.09
SSN3YPL042C LDB16P25587 256 aa8.27□□□□□ -1.09
SSN3YPL042C SHE2P36068 246 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
SSN3YPL042C HAC1P41546 238 aa8.27□□□□□ -1.09
SSN3YPL042C RPL9BP51401 191 aaKnown RBP8.27□□□□□ -1.09
SSN3YPL042C SKP1P52286 194 aa8.27□□□□□ -1.09
SSN3YPL042C YPL108WQ02872 168 aaPredicted RBP8.27□□□□□ -1.09
SSN3YPL042C SWM1Q12379 170 aa8.27□□□□□ -1.09
SSN3YPL042C RPL11BQ3E757 174 aaPredicted RBP8.27□□□□□ -1.09
SSN3YPL042C SUS1Q6WNK7 96 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 88.7 ms