RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSP1	YJL041W	ILV1	P00927	576 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	COX9	P07255	59 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	RPS16A	P0CX51	143 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	RPS16B	P0CX52	143 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	GPI12	P23797	304 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	SCO1	P23833	295 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	TRX3	P25372	127 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	TIP1	P27654	210 aa	Predicted RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	OAC1	P32332	324 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	RPS20	P38701	121 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	CIN2	P46670	268 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	TAX4	P47030	604 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	SBH1	P52870	82 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	PNC1	P53184	216 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	CDH1	P53197	566 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	FRE4	P53746	719 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	PGA1	P53896	198 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	YNL140C	P53910	189 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	CRD1	Q07560	283 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	YKL033W-A	Q86ZR7	236 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	DET1	Q99288	334 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	YLR415C	O13578	112 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	PDE1	P22434	369 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	YCR090C	P25654	182 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	RPA12	P32529	125 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	REC114	P32841	428 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	RPB11	P38902	120 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	NSA2	P40078	261 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	POP1	P41812	875 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	IRC15	Q02733	499 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	ARA2	Q04212	335 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	ASM4	Q05166	528 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	IRC13	Q08630	104 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	YPL162C	Q12042	273 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	PRS5	Q12265	496 aa	Known RBP	3.1	□□□□□ -1.91
NSP1	YJL041W	YIL102C-A	Q2V2P5	75 aa		3.1	□□□□□ -1.91
NSP1	YJL041W	YEL076C-A	P0CX16	216 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	YLR464W	P0CX17	216 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	ADK2	P26364	225 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
NSP1	YJL041W	TRR2	P38816	342 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	YEL076C	P39971	216 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	YGL230C	P53074	147 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	PRM8	P53174	237 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	MTM1	P53320	366 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	TIM10	P87108	93 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	HRD3	Q05787	833 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	PRM3	Q08931	133 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	EAF3	Q12432	401 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	IZH2	Q12442	317 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	MOT1	P32333	1867 aa		3.09	□□□□□ -1.91
NSP1	YJL041W	RIF1	P29539	1916 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	YDR157W	A0A023PZE8	133 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	RPS13	P05756	151 aa	Known RBP	3.09	□□□□□ -1.92
NSP1	YJL041W	UBC5	P15732	148 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	PPZ2	P33329	710 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	YPL077C	Q02831	240 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	CCE1	Q03702	353 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	CAB5	Q03941	241 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	YDR415C	Q04033	374 aa	Predicted RBP	3.09	□□□□□ -1.92
NSP1	YJL041W	SEN15	Q04675	128 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	YLR296W	Q05898	108 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	ENB1	Q08299	606 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	GRE1	Q08969	168 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	YLR050C	Q12155	161 aa	Known RBP	3.09	□□□□□ -1.92
NSP1	YJL041W	RDL1	Q12305	139 aa	Known RBP	3.09	□□□□□ -1.92
NSP1	YJL041W	YLR363W-A	Q3E747	85 aa		3.09	□□□□□ -1.92
NSP1	YJL041W	VPS63	O13549	108 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	ADK1	P07170	222 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	FCY2	P17064	533 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	NTF2	P33331	125 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	YHL026C	P38740	315 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	YER076C	P40049	302 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	BRR6	P53062	197 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	GEP7	P53171	287 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	YNL184C	P53876	108 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	MSS11	Q03825	758 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	YOL159C	Q08300	171 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	YDL157C	Q12082	118 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	FRE7	Q12333	620 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	NPC2	Q12408	173 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	RPS21B	Q3E754	87 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	YBR255C-A	Q3E776	120 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	SOD2	P00447	233 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	RAS2	P01120	322 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	POR1	P04840	283 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	RPL7A	P05737	244 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	CHO1	P08456	276 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	RPS21A	P0C0V8	87 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	MRP20	P32387	263 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	MKK1	P32490	508 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	CDC5	P32562	705 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	TKL2	P33315	681 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	SOR1	P35497	357 aa	Known RBP	3.08	□□□□□ -1.92
NSP1	YJL041W	FRM2	P37261	193 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	UMP1	P38293	148 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	MIC12	P38341	106 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	PSD1	P39006	500 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	YAL037W	P39728	267 aa		3.08	□□□□□ -1.92
NSP1	YJL041W	HAT2	P39984	401 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 103.3 ms