RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC43	YGL155W	SSS1	P35179	80 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	AIM3	P38266	947 aa	Known RBP	4.65	□□□□□ -1.67
CDC43	YGL155W	PTC7	P38797	343 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	SUR2	P38992	349 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	RFC2	P40348	353 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	ATF1	P40353	525 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	PRM5	P40476	318 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	YIL029C	P40538	142 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	PHS1	P40857	217 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	RTS2	P40962	232 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	PAU4	P53427	120 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	PDR17	P53844	350 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	MRPL19	P53875	158 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	SKO1	Q02100	647 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	TRS23	Q03784	219 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	FSH2	Q05015	223 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	HOF1	Q05080	669 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	YDL242W	Q07746	117 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	RAD28	Q12021	506 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	SME1	Q12330	94 aa	Predicted RBP	4.65	□□□□□ -1.67
CDC43	YGL155W	IZH2	Q12442	317 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	YIL046W-A	Q3E7Z4	54 aa		4.65	□□□□□ -1.67
CDC43	YGL155W	FAS1	P07149	2051 aa	Known RBP	4.65	□□□□□ -1.67
CDC43	YGL155W	PAU1	P0CE88	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PAU14	P0CE89	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PAU6	P0CE90	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PAU18	P0CE91	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PAU8	P0CE92	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PAU11	P0CE93	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PCL1	P24867	279 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	DUT1	P33317	147 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	NTF2	P33331	125 aa	Known RBP	4.64	□□□□□ -1.67
CDC43	YGL155W	YNK1	P36010	153 aa	Known RBP	4.64	□□□□□ -1.67
CDC43	YGL155W	MCH2	P36032	473 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	AVT5	P38176	459 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	NTC20	P38302	140 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC43	YGL155W	PAU13	P38725	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	RTC3	P38804	111 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC43	YGL155W	HSP10	P38910	106 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	YER158C	P40095	573 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	BNS1	P50084	137 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	YGL114W	P53134	725 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	YPL108W	Q02872	168 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC43	YGL155W	ATG21	Q02887	496 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PAU10	Q03050	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	TSA2	Q04120	196 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	AVO2	Q04749	426 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	CRR1	Q05790	422 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	CTR3	Q06686	241 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PML1	Q07930	204 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC43	YGL155W	PAU20	Q08322	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	FRE8	Q12209	686 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PRR2	Q12310	699 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	PAU9	Q3E770	120 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	COA2	Q3E823	68 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	HUG1	Q6Q5K6	68 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	ATG40	Q99325	256 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	TAO3	P40468	2376 aa		4.64	□□□□□ -1.67
CDC43	YGL155W	CBP6	P07253	162 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	SAG1	P20840	650 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	RPL14A	P36105	138 aa	Known RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	RPL14B	P38754	138 aa	Known RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	FLO5	P38894	1075 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	YER079W	P40052	210 aa	Known RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	LSM4	P40070	187 aa	Known RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	FLX1	P40464	311 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	DUG1	P43616	481 aa	Known RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	RIB4	P50861	169 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	TNA1	P53322	534 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	ALG12	P53730	551 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	TEX1	P53851	422 aa	Known RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	NUP53	Q03790	475 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	DPB4	Q04603	196 aa	Known RBP	4.63	□□□□□ -1.67
CDC43	YGL155W	UPS1	Q05776	175 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	COQ11	Q05892	277 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	PIN3	Q06449	215 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	YOR292C	Q08743	309 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	YPL264C	Q08980	353 aa		4.63	□□□□□ -1.67
CDC43	YGL155W	RPL7A	P05737	244 aa	Known RBP	4.62	□□□□□ -1.67
CDC43	YGL155W	QCR9	P22289	66 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	SPO13	P23624	291 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	ALK2	P32789	676 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC43	YGL155W	SHB17	P36136	271 aa	Known RBP	4.62	□□□□□ -1.67
CDC43	YGL155W	SWD3	P38123	315 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	YBR013C	P38215	129 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	IRC22	P40006	225 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	NOP16	P40007	231 aa	Known RBP	4.62	□□□□□ -1.67
CDC43	YGL155W	ECO1	P43605	281 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	TTI2	P47168	421 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	NRM1	P53718	249 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	ARL3	Q02804	198 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	MRP51	Q02950	344 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	YDR391C	Q04170	232 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	YPR098C	Q06089	161 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	YFH1	Q07540	174 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	HRD1	Q08109	551 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	RPL7B	Q12213	244 aa	Known RBP	4.62	□□□□□ -1.67
CDC43	YGL155W	YDL180W	Q12301	547 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	COA6	Q3E846	104 aa		4.62	□□□□□ -1.67
CDC43	YGL155W	PAU19	P0CE85	124 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms