RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W POR1P04840 283 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W RAD6P06104 172 aa2.89□□□□□ -1.95
USE1YGL098W DPM1P14020 267 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W SAG1P20840 650 aa2.89□□□□□ -1.95
USE1YGL098W MIH1P23748 554 aa2.89□□□□□ -1.95
USE1YGL098W MEK1P24719 497 aaPredicted RBP2.89□□□□□ -1.95
USE1YGL098W PCL1P24867 279 aa2.89□□□□□ -1.95
USE1YGL098W MIG1P27705 504 aa2.89□□□□□ -1.95
USE1YGL098W YMC1P32331 307 aa2.89□□□□□ -1.95
USE1YGL098W MSS51P32335 436 aa2.89□□□□□ -1.95
USE1YGL098W MKK2P32491 506 aa2.89□□□□□ -1.95
USE1YGL098W SRB5P32585 307 aa2.89□□□□□ -1.95
USE1YGL098W RAD23P32628 398 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W UGX2P32772 223 aa2.89□□□□□ -1.95
USE1YGL098W SLC1P33333 303 aa2.89□□□□□ -1.95
USE1YGL098W NNK1P36003 928 aa2.89□□□□□ -1.95
USE1YGL098W CMC1P36064 111 aa2.89□□□□□ -1.95
USE1YGL098W YBR071WP38243 211 aa2.89□□□□□ -1.95
USE1YGL098W ECM33P38248 429 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W PHO88P38264 188 aaPredicted RBP2.89□□□□□ -1.95
USE1YGL098W UMP1P38293 148 aa2.89□□□□□ -1.95
USE1YGL098W BAT1P38891 393 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W GPP2P40106 250 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W PRE5P40302 234 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W IST3P40565 148 aaPredicted RBP2.89□□□□□ -1.95
USE1YGL098W SNO3P43544 222 aa2.89□□□□□ -1.95
USE1YGL098W OTU1P43558 301 aa2.89□□□□□ -1.95
USE1YGL098W HIT1P46973 164 aa2.89□□□□□ -1.95
USE1YGL098W SAM37P50110 327 aa2.89□□□□□ -1.95
USE1YGL098W DUO1P53168 247 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W YGR015CP53208 328 aa2.89□□□□□ -1.95
USE1YGL098W SNO2P53823 222 aa2.89□□□□□ -1.95
USE1YGL098W DUG3P53871 357 aa2.89□□□□□ -1.95
USE1YGL098W SUR7P54003 302 aa2.89□□□□□ -1.95
USE1YGL098W DAD3P69850 94 aa2.89□□□□□ -1.95
USE1YGL098W ECM18Q04623 453 aa2.89□□□□□ -1.95
USE1YGL098W SNO4Q04902 237 aa2.89□□□□□ -1.95
USE1YGL098W FSH2Q05015 223 aa2.89□□□□□ -1.95
USE1YGL098W LIP2Q06005 328 aa2.89□□□□□ -1.95
USE1YGL098W YPR098CQ06089 161 aa2.89□□□□□ -1.95
USE1YGL098W YPR174CQ06616 221 aaPredicted RBP2.89□□□□□ -1.95
USE1YGL098W YOR378WQ08902 515 aa2.89□□□□□ -1.95
USE1YGL098W HSP33Q08914 237 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W HSP32Q08992 237 aa2.89□□□□□ -1.95
USE1YGL098W DET1Q99288 334 aaKnown RBP2.89□□□□□ -1.95
USE1YGL098W ODC2Q99297 307 aa2.89□□□□□ -1.95
USE1YGL098W RPL27AP0C2H6 136 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W RPL27BP0C2H7 136 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W YOL162WP0CF19 215 aa2.88□□□□□ -1.95
USE1YGL098W HEM13P11353 328 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W OLE1P21147 510 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W YGL010WP25338 174 aa2.88□□□□□ -1.95
USE1YGL098W TRX3P25372 127 aa2.88□□□□□ -1.95
USE1YGL098W FUN19P28003 413 aaPredicted RBP2.88□□□□□ -1.95
USE1YGL098W SOR1P35497 357 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W RPL14AP36105 138 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W VBA2P38358 474 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W ATX1P38636 73 aa2.88□□□□□ -1.95
USE1YGL098W WSC4P38739 605 aa2.88□□□□□ -1.95
USE1YGL098W RPL14BP38754 138 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W FYV4P38783 130 aaPredicted RBP2.88□□□□□ -1.95
USE1YGL098W YHR138CP38841 114 aaPredicted RBP2.88□□□□□ -1.95
USE1YGL098W RPS26AP39938 119 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W RPS26BP39939 119 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W PIC2P40035 300 aa2.88□□□□□ -1.95
USE1YGL098W YER085CP40058 173 aa2.88□□□□□ -1.95
USE1YGL098W YJL068CP40363 299 aa2.88□□□□□ -1.95
USE1YGL098W PRM5P40476 318 aa2.88□□□□□ -1.95
USE1YGL098W YIL089WP40500 205 aa2.88□□□□□ -1.95
USE1YGL098W YIL060WP40519 144 aa2.88□□□□□ -1.95
USE1YGL098W GPP1P41277 250 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W HAC1P41546 238 aa2.88□□□□□ -1.95
USE1YGL098W ERJ5P43613 295 aaPredicted RBP2.88□□□□□ -1.95
USE1YGL098W TIS11P47977 285 aa2.88□□□□□ -1.95
USE1YGL098W SBH2P52871 88 aa2.88□□□□□ -1.95
USE1YGL098W ERG25P53045 309 aa2.88□□□□□ -1.95
USE1YGL098W YGL230CP53074 147 aa2.88□□□□□ -1.95
USE1YGL098W LST7P53237 242 aa2.88□□□□□ -1.95
USE1YGL098W CAB4P53332 305 aa2.88□□□□□ -1.95
USE1YGL098W YNR064CP53750 290 aa2.88□□□□□ -1.95
USE1YGL098W SKO1Q02100 647 aa2.88□□□□□ -1.95
USE1YGL098W TSA2Q04120 196 aa2.88□□□□□ -1.95
USE1YGL098W NMA1Q06178 401 aaKnown RBP2.88□□□□□ -1.95
USE1YGL098W POS5Q06892 414 aa2.88□□□□□ -1.95
USE1YGL098W SOR2Q07786 357 aa2.88□□□□□ -1.95
USE1YGL098W ENB1Q08299 606 aa2.88□□□□□ -1.95
USE1YGL098W ORT1Q12375 292 aa2.88□□□□□ -1.95
USE1YGL098W FMP49A0A023PZB3 126 aa2.87□□□□□ -1.95
USE1YGL098W COX1P00401 534 aa2.87□□□□□ -1.95
USE1YGL098W VAR1P02381 398 aa2.87□□□□□ -1.95
USE1YGL098W FCY2P17064 533 aa2.87□□□□□ -1.95
USE1YGL098W HOG1P32485 435 aa2.87□□□□□ -1.95
USE1YGL098W MKK1P32490 508 aa2.87□□□□□ -1.95
USE1YGL098W ZRT1P32804 376 aa2.87□□□□□ -1.95
USE1YGL098W PHD1P36093 366 aa2.87□□□□□ -1.95
USE1YGL098W DER1P38307 211 aa2.87□□□□□ -1.95
USE1YGL098W FLO5P38894 1075 aa2.87□□□□□ -1.95
USE1YGL098W OXA1P39952 402 aa2.87□□□□□ -1.95
USE1YGL098W SFH5P47008 294 aa2.87□□□□□ -1.95
USE1YGL098W EMC4P53073 190 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms