RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C AIM25P47140 327 aa-2.05□□□□□ -2.74
SPG3YDR504C THG1P53215 237 aaKnown RBP-2.05□□□□□ -2.74
SPG3YDR504C MPC3P53311 146 aa-2.05□□□□□ -2.74
SPG3YDR504C SEN15Q04675 128 aa-2.05□□□□□ -2.74
SPG3YDR504C YLR173WQ06247 608 aa-2.05□□□□□ -2.74
SPG3YDR504C YIL177CP40434 1758 aa-2.05□□□□□ -2.74
SPG3YDR504C YJL225CP40889 1758 aa-2.05□□□□□ -2.74
SPG3YDR504C SRB4P32569 687 aa-2.06□□□□□ -2.74
SPG3YDR504C RNH202Q05635 350 aa-2.06□□□□□ -2.74
SPG3YDR504C SNU23Q12368 194 aaPredicted RBP-2.06□□□□□ -2.74
SPG3YDR504C SSK22P25390 1331 aaPredicted RBP-2.07□□□□□ -2.74
SPG3YDR504C YKR070WP36151 352 aaKnown RBP-2.07□□□□□ -2.74
SPG3YDR504C YDR209CQ03480 137 aa-2.07□□□□□ -2.74
SPG3YDR504C DGA1Q08650 418 aa-2.07□□□□□ -2.74
SPG3YDR504C BTS1Q12051 335 aa-2.07□□□□□ -2.74
SPG3YDR504C OSW5P40219 148 aa-2.08□□□□□ -2.74
SPG3YDR504C LAA1P39526 2014 aa-2.08□□□□□ -2.74
SPG3YDR504C ARO7P32178 256 aa-2.09□□□□□ -2.74
SPG3YDR504C SOL1P50278 321 aa-2.1□□□□□ -2.75
SPG3YDR504C TDA8Q6B2U8 126 aa-2.1□□□□□ -2.75
SPG3YDR504C URA2P07259 2214 aaKnown RBP-2.11□□□□□ -2.75
SPG3YDR504C COX2P00410 251 aa-2.11□□□□□ -2.75
SPG3YDR504C MRP1P10662 321 aaKnown RBP-2.11□□□□□ -2.75
SPG3YDR504C UTP30P36144 274 aaKnown RBP-2.11□□□□□ -2.75
SPG3YDR504C ERG28P40030 148 aa-2.11□□□□□ -2.75
SPG3YDR504C YLR126CQ12288 251 aa-2.11□□□□□ -2.75
SPG3YDR504C URA5P13298 226 aaKnown RBP-2.12□□□□□ -2.75
SPG3YDR504C YJR149WP47177 404 aa-2.12□□□□□ -2.75
SPG3YDR504C RIF1P29539 1916 aa-2.13□□□□□ -2.75
SPG3YDR504C SFK1P35735 353 aa-2.13□□□□□ -2.75
SPG3YDR504C ETR1P38071 380 aa-2.13□□□□□ -2.75
SPG3YDR504C CSM4Q08955 156 aa-2.13□□□□□ -2.75
SPG3YDR504C BNI1P41832 1953 aa-2.13□□□□□ -2.75
SPG3YDR504C ROM2P51862 1356 aaKnown RBP-2.13□□□□□ -2.75
SPG3YDR504C PHO85P17157 305 aa-2.14□□□□□ -2.75
SPG3YDR504C ATP15P21306 62 aa-2.14□□□□□ -2.75
SPG3YDR504C CLG1P35190 452 aa-2.15□□□□□ -2.75
SPG3YDR504C MCM22P47167 239 aa-2.15□□□□□ -2.75
SPG3YDR504C IRC23Q08416 157 aa-2.15□□□□□ -2.75
SPG3YDR504C PST2Q12335 198 aaKnown RBP-2.15□□□□□ -2.75
SPG3YDR504C BET1P22804 142 aa-2.16□□□□□ -2.76
SPG3YDR504C PRM8P53174 237 aa-2.16□□□□□ -2.76
SPG3YDR504C YDR249CQ03787 373 aa-2.16□□□□□ -2.76
SPG3YDR504C GET4Q12125 312 aa-2.16□□□□□ -2.76
SPG3YDR504C POR1P04840 283 aaKnown RBP-2.17□□□□□ -2.76
SPG3YDR504C IDH1P28834 360 aaKnown RBP RIP-Chip data-2.17□□□□□ -2.76not detected
SPG3YDR504C MSN4P33749 630 aa-2.17□□□□□ -2.76
SPG3YDR504C AST2P39945 430 aaKnown RBP-2.17□□□□□ -2.76
SPG3YDR504C YAR1P46683 200 aa-2.17□□□□□ -2.76
SPG3YDR504C DRS2P39524 1355 aa-2.18□□□□□ -2.76
SPG3YDR504C SBH2P52871 88 aa-2.18□□□□□ -2.76
SPG3YDR504C YDR286CQ05530 114 aa-2.18□□□□□ -2.76
SPG3YDR504C GSC2P40989 1895 aa-2.18□□□□□ -2.76
SPG3YDR504C SHB17P36136 271 aaKnown RBP-2.19□□□□□ -2.76
SPG3YDR504C MGR2Q02889 113 aa-2.19□□□□□ -2.76
SPG3YDR504C GRE1Q08969 168 aa-2.19□□□□□ -2.76
SPG3YDR504C RPB3P16370 318 aaKnown RBP-2.2□□□□□ -2.76
SPG3YDR504C TRX1P22217 103 aaKnown RBP-2.2□□□□□ -2.76
SPG3YDR504C GSP2P32836 220 aaKnown RBP-2.2□□□□□ -2.76
SPG3YDR504C UBC6P33296 250 aaPredicted RBP-2.2□□□□□ -2.76
SPG3YDR504C GET1P53192 235 aa-2.2□□□□□ -2.76
SPG3YDR504C TCA17P32613 152 aa-2.21□□□□□ -2.76
SPG3YDR504C YGL235WP53071 178 aa-2.21□□□□□ -2.76
SPG3YDR504C NOP19P53317 196 aaPredicted RBP-2.21□□□□□ -2.76
SPG3YDR504C PGC1Q08959 321 aa-2.21□□□□□ -2.76
SPG3YDR504C MDY2Q12285 212 aa-2.21□□□□□ -2.76
SPG3YDR504C RRP36Q12481 300 aaPredicted RBP-2.21□□□□□ -2.76
SPG3YDR504C YLR422WQ06409 1932 aa-2.21□□□□□ -2.76
SPG3YDR504C KIN28P06242 306 aa-2.22□□□□□ -2.76
SPG3YDR504C KSS1P14681 368 aa-2.22□□□□□ -2.76
SPG3YDR504C PPA2P28239 310 aa-2.22□□□□□ -2.76
SPG3YDR504C YBL010CP32788 280 aa-2.22□□□□□ -2.76
SPG3YDR504C SER2P42941 309 aa-2.22□□□□□ -2.76
SPG3YDR504C PDR17P53844 350 aa-2.22□□□□□ -2.76
SPG3YDR504C COX20Q04935 205 aa-2.22□□□□□ -2.76
SPG3YDR504C SEY1Q99287 776 aa-2.22□□□□□ -2.76
SPG3YDR504C FAS2P19097 1887 aaKnown RBP-2.22□□□□□ -2.77
SPG3YDR504C RPS22AP0C0W1 130 aaKnown RBP-2.23□□□□□ -2.77
SPG3YDR504C ADE1P27616 306 aa-2.23□□□□□ -2.77
SPG3YDR504C ASF2P32448 525 aaPredicted RBP-2.23□□□□□ -2.77
SPG3YDR504C YOR034C-AQ3E735 80 aa-2.23□□□□□ -2.77
SPG3YDR504C RPS22BQ3E7Y3 130 aaKnown RBP-2.23□□□□□ -2.77
SPG3YDR504C HTD2P38790 280 aaKnown RBP-2.24□□□□□ -2.77
SPG3YDR504C YGL230CP53074 147 aa-2.24□□□□□ -2.77
SPG3YDR504C YOR072WQ08486 104 aa-2.24□□□□□ -2.77
SPG3YDR504C MYO1P08964 1928 aa-2.25□□□□□ -2.77
SPG3YDR504C POL30P15873 258 aaKnown RBP-2.25□□□□□ -2.77
SPG3YDR504C STF2P16965 84 aa-2.25□□□□□ -2.77
SPG3YDR504C MPM1P40364 252 aa-2.25□□□□□ -2.77
SPG3YDR504C RRP17Q04031 235 aaPredicted RBP-2.25□□□□□ -2.77
SPG3YDR504C FCY1Q12178 158 aa-2.25□□□□□ -2.77
SPG3YDR504C YOR342CQ12182 319 aa-2.25□□□□□ -2.77
SPG3YDR504C POL2P21951 2222 aaKnown RBP-2.26□□□□□ -2.77
SPG3YDR504C RRN5Q02983 363 aa-2.26□□□□□ -2.77
SPG3YDR504C YMR295CQ03559 197 aa-2.26□□□□□ -2.77
SPG3YDR504C CDC123Q05791 360 aa-2.26□□□□□ -2.77
SPG3YDR504C SDO1Q07953 250 aaKnown RBP-2.26□□□□□ -2.77
SPG3YDR504C CFT1Q06632 1357 aaKnown RBP-2.26□□□□□ -2.77
SPG3YDR504C YCR023CP25351 611 aa-2.27□□□□□ -2.77
SPG3YDR504C YHR140WP38842 239 aa-2.27□□□□□ -2.77
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms