RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C HTD2P38790 280 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C IRC18P47056 224 aa2.77□□□□□ -1.97
CDC40YDR364C TAD2P47058 250 aa2.77□□□□□ -1.97
CDC40YDR364C CCC1P47818 322 aa2.77□□□□□ -1.97
CDC40YDR364C ARO8P53090 500 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C ERV29P53337 310 aa2.77□□□□□ -1.97
CDC40YDR364C ASI3P53983 676 aa2.77□□□□□ -1.97
CDC40YDR364C PET191Q02772 108 aa2.77□□□□□ -1.97
CDC40YDR364C YPL077CQ02831 240 aa2.77□□□□□ -1.97
CDC40YDR364C SCS7Q03529 384 aa2.77□□□□□ -1.97
CDC40YDR364C YDR102CQ03864 110 aa2.77□□□□□ -1.97
CDC40YDR364C NIP7Q08962 181 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C YOR283WQ12040 230 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C ATG41Q12048 136 aa2.77□□□□□ -1.97
CDC40YDR364C AYT1Q12226 474 aa2.77□□□□□ -1.97
CDC40YDR364C UTP23Q12339 254 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C BRR2P32639 2163 aaKnown RBP2.77□□□□□ -1.97
CDC40YDR364C STT4P37297 1900 aa2.76□□□□□ -1.97
CDC40YDR364C HIS3P06633 220 aa2.76□□□□□ -1.97
CDC40YDR364C GCN3P14741 305 aa2.76□□□□□ -1.97
CDC40YDR364C MDH2P22133 377 aa2.76□□□□□ -1.97
CDC40YDR364C CAM1P29547 415 aaKnown RBP2.76□□□□□ -1.97
CDC40YDR364C ATS1P31386 333 aa2.76□□□□□ -1.97
CDC40YDR364C HYM1P32464 399 aa2.76□□□□□ -1.97
CDC40YDR364C SFK1P35735 353 aa2.76□□□□□ -1.97
CDC40YDR364C MIX23P38162 196 aa2.76□□□□□ -1.97
CDC40YDR364C PTH1P38876 190 aaKnown RBP2.76□□□□□ -1.97
CDC40YDR364C HPA3P39979 161 aa2.76□□□□□ -1.97
CDC40YDR364C RFC4P40339 323 aaKnown RBP2.76□□□□□ -1.97
CDC40YDR364C YKE4P40544 346 aa2.76□□□□□ -1.97
CDC40YDR364C TIR3P40552 269 aa2.76□□□□□ -1.97
CDC40YDR364C TPN1P53099 579 aa2.76□□□□□ -1.97
CDC40YDR364C WSC2P53832 503 aa2.76□□□□□ -1.97
CDC40YDR364C LSM7P53905 115 aaKnown RBP2.76□□□□□ -1.97
CDC40YDR364C MRPS17Q03246 237 aaPredicted RBP2.76□□□□□ -1.97
CDC40YDR364C YLR283WQ05867 314 aa2.76□□□□□ -1.97
CDC40YDR364C PEX30Q06169 523 aa2.76□□□□□ -1.97
CDC40YDR364C NMA1Q06178 401 aaKnown RBP2.76□□□□□ -1.97
CDC40YDR364C MIM1Q08176 113 aa2.76□□□□□ -1.97
CDC40YDR364C TMS1Q12116 473 aa2.76□□□□□ -1.97
CDC40YDR364C YHR214C-EQ8TGK0 99 aa2.76□□□□□ -1.97
CDC40YDR364C Q0144Q9ZZW2 109 aa2.76□□□□□ -1.97
CDC40YDR364C MRS3P10566 314 aa2.75□□□□□ -1.97
CDC40YDR364C NAM2P11325 894 aa2.75□□□□□ -1.97
CDC40YDR364C SPS100P13130 326 aa2.75□□□□□ -1.97
CDC40YDR364C INO2P26798 304 aa2.75□□□□□ -1.97
CDC40YDR364C RNP1P32385 249 aa2.75□□□□□ -1.97
CDC40YDR364C ERG24P32462 438 aaKnown RBP2.75□□□□□ -1.97
CDC40YDR364C AIM29P36154 155 aa2.75□□□□□ -1.97
CDC40YDR364C AVT5P38176 459 aa2.75□□□□□ -1.97
CDC40YDR364C YBR242WP38331 238 aa2.75□□□□□ -1.97
CDC40YDR364C SSH1P38353 490 aaKnown RBP2.75□□□□□ -1.97
CDC40YDR364C DLS1P40366 167 aa2.75□□□□□ -1.97
CDC40YDR364C RPR2P40571 144 aa2.75□□□□□ -1.97
CDC40YDR364C HAC1P41546 238 aa2.75□□□□□ -1.97
CDC40YDR364C MNN5P46982 586 aa2.75□□□□□ -1.97
CDC40YDR364C YGL204CP53089 101 aa2.75□□□□□ -1.97
CDC40YDR364C MST27P53176 234 aa2.75□□□□□ -1.97
CDC40YDR364C MTM1P53320 366 aa2.75□□□□□ -1.97
CDC40YDR364C AAH1P53909 347 aa2.75□□□□□ -1.97
CDC40YDR364C YLR152CP54072 576 aa2.75□□□□□ -1.97
CDC40YDR364C CTF19Q02732 369 aa2.75□□□□□ -1.97
CDC40YDR364C NNT1Q05874 261 aa2.75□□□□□ -1.97
CDC40YDR364C CTR3Q06686 241 aa2.75□□□□□ -1.97
CDC40YDR364C YOL024WQ08172 172 aa2.75□□□□□ -1.97
CDC40YDR364C FCY22Q12119 530 aa2.75□□□□□ -1.97
CDC40YDR364C TFC7Q12415 435 aa2.75□□□□□ -1.97
CDC40YDR364C FLO9P39712 1322 aa2.75□□□□□ -1.97
CDC40YDR364C TRP1P00912 224 aa2.74□□□□□ -1.97
CDC40YDR364C RPL15AP05748 204 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C HEM4P06174 275 aa2.74□□□□□ -1.97
CDC40YDR364C CBP6P07253 162 aaPredicted RBP2.74□□□□□ -1.97
CDC40YDR364C SPS2P08459 502 aa2.74□□□□□ -1.97
CDC40YDR364C RPL23AP0CX41 137 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C RPL23BP0CX42 137 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C PET54P10834 293 aa2.74□□□□□ -1.97
CDC40YDR364C ZRC1P20107 442 aa2.74□□□□□ -1.97
CDC40YDR364C KTI12P34253 313 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C RCN1P36054 211 aa2.74□□□□□ -1.97
CDC40YDR364C MRPL3P36516 390 aa2.74□□□□□ -1.97
CDC40YDR364C FRM2P37261 193 aa2.74□□□□□ -1.97
CDC40YDR364C MIC12P38341 106 aa2.74□□□□□ -1.97
CDC40YDR364C SMB1P40018 196 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C CAT5P41735 233 aa2.74□□□□□ -1.97
CDC40YDR364C ERJ5P43613 295 aaPredicted RBP2.74□□□□□ -1.97
CDC40YDR364C YJL016WP47072 561 aa2.74□□□□□ -1.97
CDC40YDR364C AIM25P47140 327 aa2.74□□□□□ -1.97
CDC40YDR364C ADO1P47143 340 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C DIE2P50076 525 aa2.74□□□□□ -1.97
CDC40YDR364C VHT1P53241 593 aa2.74□□□□□ -1.97
CDC40YDR364C NRK1P53915 240 aa2.74□□□□□ -1.97
CDC40YDR364C DIG2Q03373 323 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C AIM36Q03798 255 aa2.74□□□□□ -1.97
CDC40YDR364C VBA1Q04301 562 aa2.74□□□□□ -1.97
CDC40YDR364C YLR281CQ05863 155 aa2.74□□□□□ -1.97
CDC40YDR364C HRI1Q05905 244 aaKnown RBP2.74□□□□□ -1.97
CDC40YDR364C GRE1Q08969 168 aa2.74□□□□□ -1.97
CDC40YDR364C YPL278CQ08990 100 aa2.74□□□□□ -1.97
CDC40YDR364C SGA1P08019 549 aa2.74□□□□□ -1.97
CDC40YDR364C ATG22P25568 528 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms