RNA–Protein interactions for RNA: YDL025C

RTK1, Transcript of Putative protein kinase, potentially phosphorylated by Cdc28p, yeast

Gene RTK1, Length 1,863 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTK1	YDL025C	YLR030W	Q07967	263 aa		3.14	□□□□□ -1.91
RTK1	YDL025C	YPL257W	Q08974	193 aa		3.14	□□□□□ -1.91
RTK1	YDL025C	MDM32	Q12171	622 aa		3.14	□□□□□ -1.91
RTK1	YDL025C	LSO2	Q3E772	92 aa	Known RBP	3.14	□□□□□ -1.91
RTK1	YDL025C	YPT52	P36018	234 aa	Known RBP	3.13	□□□□□ -1.91
RTK1	YDL025C	ECM33	P38248	429 aa	Known RBP	3.13	□□□□□ -1.91
RTK1	YDL025C	SHG1	P38337	142 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	TRR2	P38816	342 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	INM2	Q05533	292 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	GEP5	Q12393	293 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	SRP14	P38985	146 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	ECO1	P43605	281 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	YFR045W	P43617	309 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	PRM8	P53174	237 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	PET191	Q02772	108 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	SNO1	Q03144	224 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	YMD8	Q03697	442 aa		3.13	□□□□□ -1.91
RTK1	YDL025C	TOM40	P23644	387 aa	Known RBP	3.12	□□□□□ -1.91
RTK1	YDL025C	DOG2	P38773	246 aa		3.12	□□□□□ -1.91
RTK1	YDL025C	DOG1	P38774	246 aa		3.12	□□□□□ -1.91
RTK1	YDL025C	FLC3	P53121	802 aa		3.12	□□□□□ -1.91
RTK1	YDL025C	HST4	P53688	370 aa		3.12	□□□□□ -1.91
RTK1	YDL025C	BBP1	Q12365	385 aa		3.12	□□□□□ -1.91
RTK1	YDL025C	TRA1	P38811	3744 aa		3.12	□□□□□ -1.91
RTK1	YDL025C	DSF1	P0CX08	502 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	YNR073C	P0CX09	502 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	ZWF1	P11412	505 aa	Known RBP	3.11	□□□□□ -1.91
RTK1	YDL025C	RCN1	P36054	211 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	AIM25	P47140	327 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	ABF2	Q02486	183 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	NOC4	Q06512	552 aa	Predicted RBP	3.11	□□□□□ -1.91
RTK1	YDL025C	USB1	Q12208	290 aa	Known RBP	3.11	□□□□□ -1.91
RTK1	YDL025C	YOR020W-A	Q3E824	90 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	ECM11	Q04110	302 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	GRH1	Q04410	372 aa	Known RBP	3.11	□□□□□ -1.91
RTK1	YDL025C	NIP7	Q08962	181 aa	Known RBP	3.11	□□□□□ -1.91
RTK1	YDL025C	AGC1	Q12482	902 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	YHR214C-E	Q8TGK0	99 aa		3.11	□□□□□ -1.91
RTK1	YDL025C	MLP1	Q02455	1875 aa	Known RBP	3.11	□□□□□ -1.91
RTK1	YDL025C	RPL25	P04456	142 aa	Known RBP	3.1	□□□□□ -1.91
RTK1	YDL025C	FCY2	P17064	533 aa		3.1	□□□□□ -1.91
RTK1	YDL025C	YGP1	P38616	354 aa	Known RBP	3.1	□□□□□ -1.91
RTK1	YDL025C	COS8	P38723	381 aa		3.1	□□□□□ -1.91
RTK1	YDL025C	PFS2	P42841	465 aa	Known RBP	3.1	□□□□□ -1.91
RTK1	YDL025C	LSM7	P53905	115 aa	Known RBP	3.1	□□□□□ -1.91
RTK1	YDL025C	YOL160W	Q08321	113 aa		3.1	□□□□□ -1.91
RTK1	YDL025C	NOT5	Q12514	560 aa	Predicted RBP	3.1	□□□□□ -1.91
RTK1	YDL025C	IGO2	Q9P305	131 aa		3.1	□□□□□ -1.91
RTK1	YDL025C	MOT1	P32333	1867 aa		3.1	□□□□□ -1.91
RTK1	YDL025C	MEC1	P38111	2368 aa		3.1	□□□□□ -1.91
RTK1	YDL025C	RAD10	P06838	210 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	MRS1	P07266	363 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	SEC4	P07560	215 aa	Known RBP	3.09	□□□□□ -1.91
RTK1	YDL025C	PUT1	P09368	476 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
RTK1	YDL025C	TAH1	P25638	111 aa	Predicted RBP	3.09	□□□□□ -1.91
RTK1	YDL025C	TRR1	P29509	319 aa	Known RBP	3.09	□□□□□ -1.91
RTK1	YDL025C	PTM1	P32857	523 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	TKL2	P33315	681 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	RPF1	P38805	295 aa	Known RBP	3.09	□□□□□ -1.91
RTK1	YDL025C	RMD6	P39975	231 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	RTC4	P53850	401 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	NRK1	P53915	240 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	GRX8	Q05926	109 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	YPR063C	Q12160	140 aa		3.09	□□□□□ -1.91
RTK1	YDL025C	YOX1	P34161	385 aa		3.09	□□□□□ -1.92
RTK1	YDL025C	YBR063C	P38083	404 aa		3.09	□□□□□ -1.92
RTK1	YDL025C	FIS1	P40515	155 aa		3.09	□□□□□ -1.92
RTK1	YDL025C	FCF1	Q05498	189 aa	Predicted RBP	3.09	□□□□□ -1.92
RTK1	YDL025C	TDA8	Q6B2U8	126 aa		3.09	□□□□□ -1.92
RTK1	YDL025C	MYO1	P08964	1928 aa		3.09	□□□□□ -1.92
RTK1	YDL025C	TRX3	P25372	127 aa		3.08	□□□□□ -1.92
RTK1	YDL025C	MID2	P36027	376 aa		3.08	□□□□□ -1.92
RTK1	YDL025C	DID2	P69771	204 aa		3.08	□□□□□ -1.92
RTK1	YDL025C	YLR036C	Q07986	203 aa		3.08	□□□□□ -1.92
RTK1	YDL025C	YOL024W	Q08172	172 aa		3.08	□□□□□ -1.92
RTK1	YDL025C	MSB2	P32334	1306 aa		3.08	□□□□□ -1.92
RTK1	YDL025C	SGA1	P08019	549 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	YPR170W-B	P0C5R9	85 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	YAR068W	P39564	161 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	PDS1	P40316	373 aa	Predicted RBP	3.07	□□□□□ -1.92
RTK1	YDL025C	RPA43	P46669	326 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	SSU72	P53538	206 aa	Predicted RBP	3.07	□□□□□ -1.92
RTK1	YDL025C	LPP1	Q04396	274 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	TCA17	P32613	152 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	IRC22	P40006	225 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	YER121W	P40076	114 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	YIR035C	P40579	254 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	YLR460C	P54007	376 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	GAS3	Q03655	524 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	ARO80	Q04052	950 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	ATG39	Q06159	398 aa		3.07	□□□□□ -1.92
RTK1	YDL025C	CDC7	P06243	507 aa		3.06	□□□□□ -1.92
RTK1	YDL025C	HIS3	P06633	220 aa		3.06	□□□□□ -1.92
RTK1	YDL025C	YIL059C	P40520	121 aa		3.06	□□□□□ -1.92
RTK1	YDL025C	OST2	P46964	130 aa		3.06	□□□□□ -1.92
RTK1	YDL025C	YNL140C	P53910	189 aa		3.06	□□□□□ -1.92
RTK1	YDL025C	ADH3	P07246	375 aa	Known RBP	3.05	□□□□□ -1.92
RTK1	YDL025C	QCR2	P07257	368 aa		3.05	□□□□□ -1.92
RTK1	YDL025C	AST2	P39945	430 aa	Known RBP	3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms