RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 GJC1P36383 396 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 SLC1A1P43005 524 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 PMS2P54278 862 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 GRM1Q13255 1194 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 ZNF568Q3ZCX4 644 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 SGO2Q562F6 1265 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 ATF7IP2Q5U623 682 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 MPZL3Q6UWV2 235 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 FASTKD5Q7L8L6 764 aaKnown RBP18.06■□□□□ 0.48
PHGDH-229ENST00000641891 C2orf40Q9H1Z8 148 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 LRRC19Q9H756 370 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 USTQ9Y2C2 406 aa18.06■□□□□ 0.48
PHGDH-229ENST00000641891 MGAMO43451 1857 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 DCDC2CA8MYV0 355 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 ZEB2O60315 1214 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 CSDE1O75534 798 aaKnown RBP18.05■□□□□ 0.48
PHGDH-229ENST00000641891 WEE2P0C1S8 567 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 EPHX2P34913 555 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 FNTAP49354 379 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 DUOXA2Q1HG44 320 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 TMEM132AQ24JP5 1023 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 PLEKHA7Q6IQ23 1121 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 TSHZ1Q6ZSZ6 1077 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 HEMGNQ9BXL5 484 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 SMARCAD1Q9H4L7 1026 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 MROH8Q9H579 483 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 PTPRHQ9HD43 1115 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 CISHQ9NSE2 258 aa18.05■□□□□ 0.48
PHGDH-229ENST00000641891 R3HDM2Q9Y2K5 976 aaKnown RBP18.05■□□□□ 0.48
PHGDH-229ENST00000641891 ERLIN2O94905 339 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 ECEL1O95672 775 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 AP3M2P53677 418 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 MBTD1Q05BQ5 628 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 KRT71Q3SY84 523 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 ARMCX2Q7L311 632 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 ANKS1BQ7Z6G8 1248 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 BCAS4Q8TDM0 211 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 RNF25Q96BH1 459 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-229ENST00000641891 FAM118BQ9BPY3 351 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 NIF3L1Q9GZT8 377 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 FZD8Q9H461 694 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 ACKR2O00590 384 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 TLR3O15455 904 aaKnown RBP18.04■□□□□ 0.48
PHGDH-229ENST00000641891 POTEJP0CG39 1038 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 SSR1P43307 286 aaKnown RBP18.04■□□□□ 0.48
PHGDH-229ENST00000641891 RPL7AP62424 266 aaKnown RBP18.04■□□□□ 0.48
PHGDH-229ENST00000641891 KRT17Q04695 432 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 C1QBPQ07021 282 aaKnown RBP18.04■□□□□ 0.48
PHGDH-229ENST00000641891 TRPC3Q13507 836 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 TTLL4Q14679 1199 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 PPP1R7Q15435 360 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 EMC10Q5UCC4 262 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 CCDC50Q8IVM0 306 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 UPF1Q92900 1129 aaKnown RBP eCLIP18.04■□□□□ 0.48
PHGDH-229ENST00000641891 PLVAPQ9BX97 442 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 KLHL11Q9NVR0 708 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 POLIQ9UNA4 740 aa18.04■□□□□ 0.48
PHGDH-229ENST00000641891 PASKQ96RG2 1323 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 HBP1O60381 514 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 C22orf31O95567 290 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 TMEM191BP0C7N4 346 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 CXCL8P10145 99 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 RALAP11233 206 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 TCF4P15884 667 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 CCT5P48643 541 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 IFFO1Q0D2I5 559 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 EAPPQ56P03 285 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-229ENST00000641891 RUFY4Q6ZNE9 571 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 USP50Q70EL3 339 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-229ENST00000641891 TFAP2BQ92481 460 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 XYLT2Q9H1B5 865 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 CDT1Q9H211 546 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 MRPL47Q9HD33 250 aaKnown RBP18.03■□□□□ 0.48
PHGDH-229ENST00000641891 NOVA2Q9UNW9 492 aaKnown RBP18.03■□□□□ 0.48
PHGDH-229ENST00000641891 ANK1P16157 1881 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 FGFR4P22455 802 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 MMP8P22894 467 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 ASPAP45381 313 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 RAP1GAPP47736 663 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 ARHGAP1Q07960 439 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 TFDP1Q14186 410 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 SGSM1Q2NKQ1 1148 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 ZNF699Q32M78 642 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 UHMK1Q8TAS1 419 aaKnown RBP18.03■□□□□ 0.48
PHGDH-229ENST00000641891 FEZF2Q8TBJ5 459 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 ART4Q93070 314 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 VCPIP1Q96JH7 1222 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 RUNDC3BQ96NL0 473 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 PABPC3Q9H361 631 aaKnown RBP18.03■□□□□ 0.48
PHGDH-229ENST00000641891 SEMA4AQ9H3S1 761 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.03■□□□□ 0.48
PHGDH-229ENST00000641891 SCINQ9Y6U3 715 aa18.03■□□□□ 0.48
PHGDH-229ENST00000641891 LSP1P33241 339 aa18.02■□□□□ 0.48
PHGDH-229ENST00000641891 TRIP13Q15645 432 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-229ENST00000641891 ARMC9Q7Z3E5 817 aa18.02■□□□□ 0.48
PHGDH-229ENST00000641891 RHOT1Q8IXI2 618 aa18.02■□□□□ 0.48
PHGDH-229ENST00000641891 EXOC8Q8IYI6 725 aa18.02■□□□□ 0.48
PHGDH-229ENST00000641891 DCLK3Q9C098 648 aa18.02■□□□□ 0.48
PHGDH-229ENST00000641891 PARVAQ9NVD7 372 aa18.02■□□□□ 0.48
PHGDH-229ENST00000641891 NXF1Q9UBU9 619 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms