RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SCYL3Q8IZE3 742 aa17.87■□□□□ 0.45
PHGDH-223ENST00000641597 FUKQ8N0W3 1084 aa17.87■□□□□ 0.45
PHGDH-223ENST00000641597 DEPTORQ8TB45 409 aa17.87■□□□□ 0.45
PHGDH-223ENST00000641597 DYDC1Q8WWB3 177 aa17.87■□□□□ 0.45
PHGDH-223ENST00000641597 CEP89Q96ST8 783 aa17.87■□□□□ 0.45
PHGDH-223ENST00000641597 C17orf75Q9HAS0 396 aa17.87■□□□□ 0.45
PHGDH-223ENST00000641597 AVENQ9NQS1 362 aaPredicted RBP17.87■□□□□ 0.45
PHGDH-223ENST00000641597 CCT8L1PA6NM43 557 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 SPATA31C2B4DYI2 1134 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 BANF1O75531 89 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 BRD2P25440 801 aaKnown RBP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 CLDN10P78369 228 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 TMEM63BQ5T3F8 832 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 SCARA5Q6ZMJ2 495 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 FAM228AQ86W67 206 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 SRRM1Q8IYB3 904 aaKnown RBP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 SLCO2A1Q92959 643 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 THOC1Q96FV9 657 aaKnown RBP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 TMEM109Q9BVC6 243 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 TJP2Q9UDY2 1190 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 DNPEPQ9ULA0 475 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 AGAP1Q9UPQ3 857 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 CNTNAP2Q9UHC6 1331 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 GJB1P08034 283 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 ITIH2P19823 946 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 MARK3P27448 753 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 CDR1P51861 262 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 ZNF280AP59817 542 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 ORC1Q13415 861 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 P3H1Q32P28 736 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 XKR3Q5GH77 459 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 CYP4A22Q5TCH4 519 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 ANGEL2Q5VTE6 544 aaKnown RBP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 IZUMO3Q5VZ72 239 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 TRMT10CQ7L0Y3 403 aaKnown RBP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 GSTA5Q7RTV2 222 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 TRIM50Q86XT4 487 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 C3orf20Q8ND61 904 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 RDM1Q8NG50 284 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 ZNF302Q9NR11 478 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 CLTAP09496 248 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 WEE2P0C1S8 567 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 GBP1P32455 592 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 OSTNP61366 133 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 NCOA4Q13772 614 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 MFSD5Q6N075 450 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 CYB5D1Q6P9G0 228 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 MFSD7Q6UXD7 560 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 ATL2Q8NHH9 583 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 ZNF606Q8WXB4 792 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 MTMR12Q9C0I1 747 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 PORCNQ9H237 461 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 KIF9Q9HAQ2 790 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 PICK1Q9NRD5 415 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.86■□□□□ 0.45
PHGDH-223ENST00000641597 IVNS1ABPQ9Y6Y0 642 aa17.86■□□□□ 0.45
PHGDH-223ENST00000641597 LCTP09848 1927 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 GAS8O95995 478 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 HIRAP54198 1017 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-223ENST00000641597 GAD2Q05329 585 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 CAPSQ13938 189 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 MIS18BP1Q6P0N0 1132 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 ENOSF1Q7L5Y1 443 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 MCEEQ96PE7 176 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 PCYT2Q99447 389 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 PLVAPQ9BX97 442 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.85■□□□□ 0.45
PHGDH-223ENST00000641597 OATP04181 439 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 BRAFP15056 766 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 NUGGCQ68CJ6 796 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 ZNF365Q70YC5 407 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 RHOT1Q8IXI2 618 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 RUNDC3BQ96NL0 473 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 ACAD9Q9H845 621 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 PIM2Q9P1W9 311 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 NAALADL1Q9UQQ1 740 aa17.85■□□□□ 0.45
PHGDH-223ENST00000641597 PHIPQ8WWQ0 1821 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 A0A0B4J269 797 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 SPDYE16A6NNV3 312 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-223ENST00000641597 GOLGA8SH3BPF8 625 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 GOLGA8MH3BSY2 632 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 ZC3H11AO75152 810 aaKnown RBP eCLIP17.84■□□□□ 0.45
PHGDH-223ENST00000641597 MYL6P60660 151 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 TCHPQ9BT92 498 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 TRAIPQ9BWF2 469 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 DHX33Q9H6R0 707 aaKnown RBP17.84■□□□□ 0.45
PHGDH-223ENST00000641597 SRGAP2CP0DJJ0 459 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 PLEKHA7Q6IQ23 1121 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 TFAP2BQ92481 460 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 SPOCK2Q92563 424 aa17.84■□□□□ 0.45
PHGDH-223ENST00000641597 RBM15Q96T37 977 aaKnown RBP eCLIP17.84■□□□□ 0.454e-7■■■□□ 17.3
PHGDH-223ENST00000641597 MAFBQ9Y5Q3 323 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-223ENST00000641597 GSTTP1A0A1W2PQM5 241 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 SPAG7O75391 227 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 ARL2P36404 184 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 SLC1A1P43005 524 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 RTP1P59025 263 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms