RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 RBM12Q9NTZ6 932 aaKnown RBP18.45■□□□□ 0.54
PHGDH-208ENST00000641023 ZNF446Q9NWS9 450 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-208ENST00000641023 NPTXRO95502 500 aa18.44■□□□□ 0.54
PHGDH-208ENST00000641023 P4HA1P13674 534 aa18.44■□□□□ 0.54
PHGDH-208ENST00000641023 VSNL1P62760 191 aa18.44■□□□□ 0.54
PHGDH-208ENST00000641023 GLE1Q53GS7 698 aaKnown RBP18.44■□□□□ 0.54
PHGDH-208ENST00000641023 REM2Q8IYK8 340 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-208ENST00000641023 VCPIP1Q96JH7 1222 aa18.44■□□□□ 0.54
PHGDH-208ENST00000641023 MTG1Q9BT17 334 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-208ENST00000641023 TRIM6Q9C030 488 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-208ENST00000641023 VRTNQ9H8Y1 702 aa18.44■□□□□ 0.54
PHGDH-208ENST00000641023 AVENQ9NQS1 362 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-208ENST00000641023 ITGA11Q9UKX5 1188 aa18.44■□□□□ 0.54
PHGDH-208ENST00000641023 ANK1P16157 1881 aa18.44■□□□□ 0.54
PHGDH-208ENST00000641023 MGAMO43451 1857 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 PGRMC1O00264 195 aaKnown RBP18.43■□□□□ 0.54
PHGDH-208ENST00000641023 ATP8B1O43520 1251 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 ZRANB2O95218 330 aaKnown RBP eCLIP18.43■□□□□ 0.54
PHGDH-208ENST00000641023 HOXC8P31273 242 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 YARSP54577 528 aaKnown RBP18.43■□□□□ 0.54
PHGDH-208ENST00000641023 RNASE9P60153 205 aaKnown RBP18.43■□□□□ 0.54
PHGDH-208ENST00000641023 NOMO3P69849 1222 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 ZNF200P98182 395 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-208ENST00000641023 PRKCZQ05513 592 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 MESDQ14696 234 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 SNX17Q15036 470 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 ZNF394Q53GI3 561 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 TAF2Q6P1X5 1199 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 SCARA5Q6ZMJ2 495 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 UBL4BQ8N7F7 174 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.43■□□□□ 0.546e-10■■■■□ 22.4
PHGDH-208ENST00000641023 CARD9Q9H257 536 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 SEPT4O43236 478 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 TOMM70O94826 608 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 RARBP10826 455 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 CRYBB1P53674 252 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-208ENST00000641023 LIN9Q5TKA1 542 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 RASGEF1CQ8N431 466 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 LRRC1Q9BTT6 524 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 BCO2Q9BYV7 579 aa18.43■□□□□ 0.54
PHGDH-208ENST00000641023 MYADML2A6NDP7 307 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 DDX3YO15523 660 aaKnown RBP18.42■□□□□ 0.54
PHGDH-208ENST00000641023 POLR2BP30876 1174 aaKnown RBP18.42■□□□□ 0.54
PHGDH-208ENST00000641023 RBP5P82980 135 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 C8orf74Q6P047 294 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 PASD1Q8IV76 773 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 CXorf38Q8TB03 319 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 RUBCNQ92622 972 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 KIF12Q96FN5 646 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 DPP3Q9NY33 737 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 SNTG2Q9NY99 539 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 ADAM22Q9P0K1 906 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 DERAQ9Y315 318 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 TMEM110-MUSTN1A8MSY1 372 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 SEC31AO94979 1220 aaKnown RBP18.42■□□□□ 0.54
PHGDH-208ENST00000641023 CFHP08603 1231 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 RRM1P23921 792 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 TNNC1P63316 161 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 SP3Q02447 781 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 CLUL1Q15846 466 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 MON1BQ7L1V2 547 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 PHF13Q86YI8 300 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-208ENST00000641023 HPDLQ96IR7 371 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 ZNF518BQ9C0D4 1074 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 WNT8AQ9H1J5 351 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 MRPL47Q9HD33 250 aaKnown RBP18.42■□□□□ 0.54
PHGDH-208ENST00000641023 TMEM59LQ9UK28 342 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 TTC7AQ9ULT0 858 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-208ENST00000641023 POLIQ9UNA4 740 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 AGAP1Q9UPQ3 857 aa18.42■□□□□ 0.54
PHGDH-208ENST00000641023 PIN4Q9Y237 131 aaKnown RBP18.42■□□□□ 0.54
PHGDH-208ENST00000641023 LSM8O95777 96 aaKnown RBP18.41■□□□□ 0.54
PHGDH-208ENST00000641023 PGK1P00558 417 aa18.41■□□□□ 0.54
PHGDH-208ENST00000641023 COMTP21964 271 aa18.41■□□□□ 0.54
PHGDH-208ENST00000641023 LONRF2Q1L5Z9 754 aa18.41■□□□□ 0.54
PHGDH-208ENST00000641023 DEFB115Q30KQ5 88 aa18.41■□□□□ 0.54
PHGDH-208ENST00000641023 TMEM40Q8WWA1 233 aa18.41■□□□□ 0.54
PHGDH-208ENST00000641023 NAP1L3Q99457 506 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-208ENST00000641023 EIF2AQ9BY44 585 aaKnown RBP18.41■□□□□ 0.54
PHGDH-208ENST00000641023 UPF3AQ9H1J1 476 aaKnown RBP18.41■□□□□ 0.54
PHGDH-208ENST00000641023 CYP3A43Q9HB55 503 aa18.41■□□□□ 0.54
PHGDH-208ENST00000641023 NOC2LQ9Y3T9 749 aaKnown RBP18.41■□□□□ 0.54
PHGDH-208ENST00000641023 SPOPO43791 374 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 AOC2O75106 756 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 STAU1O95793 577 aaKnown RBP18.4■□□□□ 0.54
PHGDH-208ENST00000641023 C1QBPQ07021 282 aaKnown RBP18.4■□□□□ 0.54
PHGDH-208ENST00000641023 MAP9Q49MG5 647 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 TMEM35BQ8NCS4 154 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 C11orf70Q9BRQ4 267 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 FAM124BQ9H5Z6 455 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-208ENST00000641023 ANAPC7Q9UJX3 599 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 PCDHGC3Q9UN70 934 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 CEP83Q9Y592 693 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 CCDC188H7C350 402 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 MED7O43513 233 aa18.4■□□□□ 0.54
PHGDH-208ENST00000641023 BRD2P25440 801 aaKnown RBP18.4■□□□□ 0.54
PHGDH-208ENST00000641023 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
PHGDH-208ENST00000641023 MYO1EQ12965 1108 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms