RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 MRPL42Q9Y6G3 142 aaKnown RBP12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 TBXAS1P24557 533 aaPredicted RBP12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 PBX3P40426 434 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 MFAP3P55082 362 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 POLR2FP61218 127 aaKnown RBP12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 KLHDC7AQ5VTJ3 777 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 LMO3Q8TAP4 145 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 TATDN2Q93075 761 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 TMEM169Q96HH4 297 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 XYLT2Q9H1B5 865 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 NLRC4Q9NPP4 1024 aa12.73□□□□□ -0.37
KCNMA1-289ENST00000640807 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 GRXCR1A8MXD5 290 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 BMP8BP34820 402 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 SCARA3Q6AZY7 606 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 CHRDL2Q6WN34 429 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 ZNF397Q8NF99 534 aaPredicted RBP12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 RC3H2Q9HBD1 1191 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 DNAJC12Q9UKB3 198 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 B4GALT3O60512 393 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 KIF4AO95239 1232 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 UCHL3P15374 230 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 APBA1Q02410 837 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 TDHQ8IZJ6 230 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 SPC24Q8NBT2 197 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 CXorf38Q8TB03 319 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 CWH43Q9H720 699 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 MSRAQ9UJ68 235 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 ADAM28Q9UKQ2 775 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 CYB561D2O14569 222 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 STAU1O95793 577 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 RFX1P22670 979 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 USP8P40818 1118 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 YWHAEP62258 255 aaKnown RBP12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 TRIM14Q14142 442 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 PHLDB3Q6NSJ2 640 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 APPL2Q8NEU8 664 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 SENP8Q96LD8 212 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 VRTNQ9H8Y1 702 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
KCNMA1-289ENST00000640807 SCN1AP35498 2009 aa12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 PPM1AP35813 382 aa12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 PBX1P40424 430 aa12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 ELAVL2Q12926 359 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 TSR1Q2NL82 804 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 FAM109BQ6ICB4 259 aaPredicted RBP12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 GJB7Q6PEY0 223 aa12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 APOBEC3GQ9HC16 384 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 POLIQ9UNA4 740 aa12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 SF3B1O75533 1304 aaKnown RBP eCLIP12.71□□□□□ -0.37
KCNMA1-289ENST00000640807 BRCC3P46736 316 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 GCNT1Q02742 428 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 KRT17Q04695 432 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 CUL2Q13617 745 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 METTL23Q86XA0 190 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 ARHGEF19Q8IW93 802 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 C3orf58Q8NDZ4 430 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 CEP72Q9P209 647 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 RWDD3Q9Y3V2 267 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 DAAM1Q9Y4D1 1078 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 PCDHA11Q9Y5I1 949 aa12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 FNDC1Q4ZHG4 1894 aaPredicted RBP12.71□□□□□ -0.38
KCNMA1-289ENST00000640807 I3L4J1 428 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 SPTLC1O15269 473 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 WEE2P0C1S8 567 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 ODC1P11926 461 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 CD58P19256 250 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 TIGD5Q53EQ6 642 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 COLGALT1Q8NBJ5 622 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 DNAI2Q9GZS0 605 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 GDAP2Q9NXN4 497 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 FHOD1Q9Y613 1164 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 TMEM189-UBE2V1I3L0A0 370 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 KRT5P13647 590 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 CDC25BP30305 580 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 CTNNB1P35222 781 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 RAB30Q15771 203 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 IQCEQ6IPM2 695 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 KIAA1841Q6NSI8 718 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 CEP57Q86XR8 500 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 TTC39CQ8N584 583 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 FAXDC2Q96IV6 333 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 EDEM3Q9BZQ6 932 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 SNX25Q9H3E2 840 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 CYP3A43Q9HB55 503 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 SIX2Q9NPC8 291 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 PDCD11Q14690 1871 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 LCHNA4D1U4 455 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 F8W810 466 aa12.7□□□□□ -0.38
KCNMA1-289ENST00000640807 ITGB1P05556 798 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms