RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SLC17A8Q8NDX2 589 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 VPS37BQ9H9H4 285 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 ATP6V0A4Q9HBG4 840 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 ETNK1Q9HBU6 452 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 ANKFY1Q9P2R3 1169 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 SYNPO2Q9UMS6 1093 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 PMM2O15305 246 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 LYPLA2O95372 231 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 KRT15P19012 456 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 LIG4P49917 911 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 GCNT1Q02742 428 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 MAMLD1Q13495 774 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 ZNF268Q14587 947 aaPredicted RBP17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 MTERF2Q49AM1 385 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 MON1BQ7L1V2 547 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 MCF2L2Q86YR7 1114 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 RHOT1Q8IXI2 618 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 CCDC89Q8N998 374 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 MAGEC3Q8TD91 643 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 TMC2Q8TDI7 906 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 APOBEC3GQ9HC16 384 aaKnown RBP17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 RIPK3Q9Y572 518 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 SKAP2O75563 359 aaPredicted RBP17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 GNA15P30679 374 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 PLCB3Q01970 1234 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 PKN2Q16513 984 aaKnown RBP17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 NLRX1Q86UT6 975 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 CCDC77Q9BR77 488 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 RXFP1Q9HBX9 757 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 SUFUQ9UMX1 484 aa17.54■□□□□ 0.4
HNRNPU-228ENST00000640306 BAATQ14032 418 aaPredicted RBP17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 TXNRD3NBQ6F5E7 133 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 ANKMY2Q8IV38 441 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 MAIP1Q8WWC4 291 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 TMEM143Q96AN5 459 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 FAM212AQ96EL1 285 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 FBXL18Q96ME1 805 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 SAE1Q9UBE0 346 aaPredicted RBP17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 NEU2Q9Y3R4 380 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 ASNSP08243 561 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 TARSP26639 723 aaKnown RBP17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 SLC1A1P43005 524 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 MSH2P43246 934 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 ARSEP51690 589 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 NOP14P78316 857 aaKnown RBP17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 STRN3Q13033 797 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 GPS1Q13098 491 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 CCNG2Q16589 344 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 USP37Q86T82 979 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 LARGE2Q8N3Y3 721 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 ERP27Q96DN0 273 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 MAGEB18Q96M61 343 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 XPNPEP1Q9NQW7 623 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 PXMP2Q9NR77 195 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 PCDHA10Q9Y5I2 948 aa17.53■□□□□ 0.4
HNRNPU-228ENST00000640306 PECAM1P16284 738 aaPredicted RBP17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 MAN1A1P33908 653 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 CENPCQ03188 943 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 SPDYE2Q495Y8 402 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 ZNF449Q6P9G9 518 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 MFSD7Q6UXD7 560 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 MOV10L1Q9BXT6 1211 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 POLR3FQ9H1D9 316 aaPredicted RBP17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 C12orf65Q9H3J6 166 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 AVENQ9NQS1 362 aaPredicted RBP17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 PRKAG3Q9UGI9 489 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 WDR91A4D1P6 747 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 FAM47DPA6NHR8 397 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 JAK3P52333 1124 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 DYNLT1P63172 113 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 NFX1Q12986 1120 aaKnown RBP17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 LIN9Q5TKA1 542 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 TLDC1Q6P9B6 456 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 VSIG1Q86XK7 387 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 ZBED8Q8IZ13 594 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 MYLK2Q9H1R3 596 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 ANKEF1Q9NU02 776 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 GRID1Q9ULK0 1009 aa17.52■□□□□ 0.4
HNRNPU-228ENST00000640306 VNN1O95497 513 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 KRT1P04264 644 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 NOMO3P69849 1222 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 IL9RQ01113 521 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 KRT76Q01546 638 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 GAD2Q05329 585 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 MTFR1Q15390 333 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 SYDE1Q6ZW31 735 aaPredicted RBP17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 NIPA1Q7RTP0 329 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 TMEM174Q8WUU8 243 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 A0A1W2PPM1 405 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 F8VP50 259 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 GCAP28676 217 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 RPA3P35244 121 aaPredicted RBP17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 SNRPFP62306 86 aaKnown RBP17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 CAV1Q03135 178 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 CCDC60Q8IWA6 550 aaPredicted RBP17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 ANKRD35Q8N283 1001 aa17.51■□□□□ 0.39
HNRNPU-228ENST00000640306 TMEM121Q9BTD3 319 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms