RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 MRPS21P82921 87 aaKnown RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 ST3GAL1Q11201 340 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 NOMO2Q5JPE7 1267 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 GLB1LQ6UWU2 654 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 TMEM173Q86WV6 379 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 MCF2L2Q86YR7 1114 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 EXTL1Q92935 676 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 MCRS1Q96EZ8 462 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 CATSPER2Q96P56 530 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 OXCT2Q9BYC2 517 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 SLC29A3Q9BZD2 475 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 SRCIN1Q9C0H9 1055 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 GAREM1Q9H706 876 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 MLXIPQ9HAP2 919 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 ATP8A2Q9NTI2 1148 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 SLC5A6Q9Y289 635 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 DDX49Q9Y6V7 483 aaKnown RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 MYLKQ15746 1914 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 PI4KAP42356 2102 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 CEP192Q8TEP8 1941 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 HEPACAM2A8MVW5 462 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 CDRT15L2A8MXV6 281 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 TMEM232C9JQI7 657 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 RNF223E7ERA6 249 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 RHOP08100 348 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 CYP7A1P22680 504 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 RBMS1P29558 406 aaKnown RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 ADORA1P30542 326 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 SLC19A1P41440 591 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 PER3P56645 1201 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 NTHL1P78549 312 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 QPCTQ16769 361 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 MARCH8Q5T0T0 291 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 CDCP2Q5VXM1 449 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 SLFN13Q68D06 897 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 BORAQ6PGQ7 559 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 USP49Q70CQ1 688 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 C9orf43Q8TAL5 461 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 TBC1D13Q9NVG8 400 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 THG1LQ9NWX6 298 aaKnown RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 MCM9Q9NXL9 1143 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 ERAP1Q9NZ08 941 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 HDAC5Q9UQL6 1122 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 NOC2LQ9Y3T9 749 aaKnown RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 KLF2Q9Y5W3 355 aaPredicted RBP3.99□□□□□ -1.77
CCDC7-213ENST00000639290 F5P12259 2224 aa3.99□□□□□ -1.77
CCDC7-213ENST00000639290 SLC38A8A6NNN8 435 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 NFIBO00712 420 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 FGF19O95750 216 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 LDOC1O95751 146 aaPredicted RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 IFIT2P09913 472 aaKnown RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 CEBPBP17676 345 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 GNLYP22749 145 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 CDR1P51861 262 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 DYNLL1P63167 89 aaKnown RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 GABREP78334 506 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 USP41Q3LFD5 358 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 CLEC10AQ8IUN9 316 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 NSUN7Q8NE18 718 aaKnown RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 HELQQ8TDG4 1101 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 IGSF8Q969P0 613 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 RIOK1Q9BRS2 568 aaKnown RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 ZNF287Q9HBT7 754 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 TBX20Q9UMR3 447 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 ATXN2Q99700 1313 aaKnown RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 ANKRD33BA6NCL7 494 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 NT5C1B-RDH14C9J2C7 533 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 DHX15O43143 795 aaKnown RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 ZNF623O75123 536 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 TTLL1O95922 423 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 RNF224P0DH78 156 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 UBA1P22314 1058 aaKnown RBP3.98□□□□□ -1.77
CCDC7-213ENST00000639290 GORABQ5T7V8 394 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 TMEM164Q5U3C3 297 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 C12orf60Q5U649 245 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 GLIS1Q8NBF1 620 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 MDGA1Q8NFP4 955 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 RPLP0P6Q8NHW5 317 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 PRR7Q8TB68 274 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 PGBD4Q96DM1 585 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 C14orf79Q96F83 325 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 GPATCH3Q96I76 525 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 BTBD1Q9H0C5 482 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 BCL11AQ9H165 835 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 ATRQ13535 2644 aa3.98□□□□□ -1.77
CCDC7-213ENST00000639290 ARHGAP10A1A4S6 786 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 LAD1O00515 517 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 ATP9BO43861 1147 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 TSPAN3O60637 253 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 MT-CO3P00414 261 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 KRT10P13645 584 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 BPIP17213 487 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 TRAPPC10P48553 1259 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 MCM2P49736 904 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 RPL6Q02878 288 aaKnown RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 RAB33AQ14088 237 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 SKOR2Q2VWA4 1001 aaPredicted RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 HLA-BQ31612 363 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms