RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 XAGE2Q96GT9 111 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 CD209Q9NNX6 404 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 PAG1Q9NWQ8 432 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 NMRK1Q9NWW6 199 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 DNAJB4Q9UDY4 337 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 GIMAP2Q9UG22 337 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 RCOR1Q9UKL0 485 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 ARL2BPQ9Y2Y0 163 aa4.53□□□□□ -1.69
SCN3A-209ENST00000639244 ASLP04424 464 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TBXAS1P24557 533 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SCNN1AP37088 669 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 HPCAP84074 193 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TRPM8Q7Z2W7 1104 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ITIH5Q86UX2 942 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 KIAA2013Q8IYS2 634 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SLC4A11Q8NBS3 891 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SSH3Q8TE77 659 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ANKS1AQ92625 1134 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 HPS1Q92902 700 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PHF21AQ96BD5 680 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TM9SF2Q99805 663 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SLC29A1Q99808 456 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 EFHD1Q9BUP0 239 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 KLHL25Q9H0H3 589 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 C12orf49Q9H741 205 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MARCH7Q9H992 704 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SLC35C2Q9NQQ7 365 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 L3MBTL1Q9Y468 752 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PCDHB3Q9Y5E6 796 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ZNFX1Q9P2E3 1918 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 UFL1O94874 794 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SLITRK3O94933 977 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 EGFRP00533 1210 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RB1P06400 928 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ANXA6P08133 673 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ITGA2BP08514 1039 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SLFN5Q08AF3 891 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RCN2Q14257 317 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 AMHR2Q16671 573 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ARHGAP11AQ6P4F7 1023 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RAB11FIP2Q7L804 512 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CYP2U1Q7Z449 544 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 METTL16Q86W50 562 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MAPKAPK5Q8IW41 473 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 C7orf31Q8N865 590 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TERB1Q8NA31 727 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 BRF1Q92994 677 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 NMD3Q96D46 503 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GMCL1Q96IK5 515 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 UCKL1Q9NWZ5 548 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 IL37Q9NZH6 218 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 KCNN3Q9UGI6 736 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GAPVD1Q14C86 1478 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 L7N2F9 121 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SORBS3O60504 671 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PSIP1O75475 530 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 IFNA16P05015 189 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CPA1P15085 419 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF12P17014 697 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RAB4BP61018 213 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PPP2R2BQ00005 443 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 C1orf146Q5VVC0 180 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 NAA35Q5VZE5 725 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 AAGABQ6PD74 315 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF619Q8N2I2 560 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 OTUD7AQ8TE49 926 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 UCMAQ8WVF2 138 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RMDN3Q96TC7 470 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GIMAP4Q9NUV9 329 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SRRM3A6NNA2 597 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SNAP29O95721 258 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SNRPAP09012 282 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ITGA2P17301 1181 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MSH2P43246 934 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 IRAK1P51617 712 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GNGT1P63211 74 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 C1orf122Q6ZSJ8 110 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RIC3Q7Z5B4 369 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 EXOC2Q96KP1 924 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CMTM3Q96MX0 182 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GIN1Q9NXP7 522 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 VPS51Q9UID3 782 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RABGEF1Q9UJ41 708 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GMEB2Q9UKD1 530 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 DNAJC16Q9Y2G8 782 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ATP8B3O60423 1300 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ANKRD34BA5PLL1 514 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 HSBP1L1C9JCN9 74 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 FPGTO14772 594 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ABCB1P08183 1280 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RPS17P08708 135 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ACADSP16219 412 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ATP6V1C1P21283 382 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 KCNA3P22001 575 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GUCY1A2P33402 732 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 NPTX2P47972 431 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ATP12AP54707 1039 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SGCGQ13326 291 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM266Q2M3C6 531 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SLC45A4Q5BKX6 768 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms