RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PROM2Q8N271 834 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 ERP27Q96DN0 273 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 SLITRK2Q9H156 845 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 GGT7Q9UJ14 662 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 MTMR6Q9Y217 621 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 DGKIO75912 1065 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 TYW3Q6IPR3 259 aaKnown RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 MYO3BQ8WXR4 1341 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 TRIM49BA6NDI0 452 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 TRIM49D1C9J1S8 452 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 PSMD3O43242 534 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 S100GP29377 79 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CEBPAP49715 358 aaPredicted RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 SCRN1Q12765 414 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 RHOT1Q8IXI2 618 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 NRDE2Q9H7Z3 1164 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 SH3BP4Q9P0V3 963 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ANO9A1A5B4 782 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CLPTM1O96005 669 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 SLC10A4Q96EP9 437 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 S100A13Q99584 98 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CNPY3Q9BT09 278 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 TMEM106CQ9BVX2 250 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CYP39A1Q9NYL5 469 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 DYRK3O43781 588 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CCDC166P0CW27 439 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ATP5JP18859 108 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ACTR2P61160 394 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 PTPN21Q16825 1174 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 SGO1Q5FBB7 561 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ASMTLO95671 621 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 NOS3P29474 1203 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 RCVRNP35243 200 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 MAPK11Q15759 364 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 TTC39BQ5VTQ0 682 aaPredicted RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CCT8L2Q96SF2 557 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 PTPN1P18031 435 aaKnown RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ZNF394Q53GI3 561 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 PDXDC2PQ6P474 469 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 MYH9P35579 1960 aaKnown RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 EPB42P16452 691 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ABRAXAS1Q6UWZ7 409 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 POMGNT2Q8NAT1 580 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ZNF473Q8WTR7 871 aaKnown RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 FAM192AQ9GZU8 254 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
UBE3A-228ENST00000638155 KIAA1586Q9HCI6 787 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CD209Q9NNX6 404 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 ATP6V1HQ9UI12 483 aa13.7□□□□□ -0.22
UBE3A-228ENST00000638155 CHP2O43745 196 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 RHAGQ02094 409 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 FHOD1Q9Y613 1164 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 PSMD12O00232 456 aaPredicted RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 ALOX15P16050 662 aaPredicted RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 SERPINB9P50453 376 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 DPYDQ12882 1025 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 LIN54Q6MZP7 749 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 LRRC71Q8N4P6 559 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 ZC3H4Q9UPT8 1303 aaKnown RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 TCP10L2B9ZVM9 353 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 IGF2BP3O00425 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 NUDT2P50583 147 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 RBBP4Q09028 425 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 NANOGNBQ7Z5D8 188 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 ATPAF2Q8N5M1 289 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 DHX35Q9H5Z1 703 aaKnown RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 FANCAO15360 1455 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 SCGNO76038 276 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 RALAP11233 206 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 FCGR1AP12314 374 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 GNA15P30679 374 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 ATN1P54259 1190 aaPredicted RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 CTSWP56202 376 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 RDM1Q8NG50 284 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 CAPN10Q9HC96 672 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 SSNA1O43805 119 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 UBXN2AP68543 259 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 BEST2Q8NFU1 509 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 HPGDP15428 266 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 EIF4A2Q14240 407 aaKnown RBP13.69□□□□□ -0.22
UBE3A-228ENST00000638155 ERAP2Q6P179 960 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 OTOAQ7RTW8 1153 aa13.69□□□□□ -0.22
UBE3A-228ENST00000638155 GRAMD1CQ8IYS0 662 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms