RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 SLC16A3O15427 465 aaKnown RBP12.69□□□□□ -0.38
CAPN3-221ENST00000638141 SPAG7O75391 227 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-221ENST00000638141 IRX4P78413 519 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 RELAQ04206 551 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 EPHA7Q15375 998 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 DNAL1Q4LDG9 190 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 SBK1Q52WX2 424 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 PACS1Q6VY07 963 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 DYMQ7RTS9 669 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 DHDDSQ86SQ9 333 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 ALLCQ8N6M5 410 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 LNX1Q8TBB1 728 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-221ENST00000638141 DDI1Q8WTU0 396 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 PLGRKTQ9HBL7 147 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 ITGB4P16144 1822 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 MYPNQ86TC9 1320 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 KDM3AQ9Y4C1 1321 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 CFAP69A5D8W1 941 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 ANKRD62A6NC57 917 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 TRMUO75648 421 aaKnown RBP12.69□□□□□ -0.38
CAPN3-221ENST00000638141 CLPTM1O96005 669 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 MSLNQ13421 630 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-221ENST00000638141 MAP7D1Q3KQU3 841 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 CCDC153Q494R4 210 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 HYIQ5T013 277 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 RIPOR1Q6ZS17 1223 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 SDR42E1Q8WUS8 393 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 SCFD1Q8WVM8 642 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 FAM161BQ96MY7 647 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-221ENST00000638141 STK33Q9BYT3 514 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 TRIM55Q9BYV6 548 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 KLHL4Q9C0H6 718 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 WNT8AQ9H1J5 351 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 GRID1Q9ULK0 1009 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 FAM32AQ9Y421 112 aaKnown RBP12.69□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF711Q9Y462 761 aa12.69□□□□□ -0.38
CAPN3-221ENST00000638141 FOXO6A8MYZ6 492 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 hCG_1984214I3L0E3 225 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 MAGEB3O15480 346 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 DENRO43583 198 aaKnown RBP12.68□□□□□ -0.38
CAPN3-221ENST00000638141 TYROBPO43914 113 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 STK10O94804 968 aaKnown RBP12.68□□□□□ -0.38
CAPN3-221ENST00000638141 IVDP26440 423 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 CHKAP35790 457 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 PFKPQ01813 784 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 PPIDQ08752 370 aaKnown RBP12.68□□□□□ -0.38
CAPN3-221ENST00000638141 PTK6Q13882 451 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 DLGAP5Q15398 846 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 LETM2Q2VYF4 491 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 PCNX4Q63HM2 1172 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF713Q8N859 430 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-221ENST00000638141 PANX3Q96QZ0 392 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 TRAIPQ9BWF2 469 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 TRABDQ9H4I3 376 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 ZNF696Q9H7X3 374 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 NPHS2Q9NP85 383 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 GPCPD1Q9NPB8 672 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 ARHGEF4Q9NR80 690 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 HEY2Q9UBP5 337 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 POLIQ9UNA4 740 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 PCDHA2Q9Y5H9 948 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 MYH11P35749 1972 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 IGSF9BQ9UPX0 1349 aa12.68□□□□□ -0.38
CAPN3-221ENST00000638141 C15orf38-AP3S2A0A0A6YYH1 394 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 CASQ2O14958 399 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-221ENST00000638141 SLC9A1P19634 815 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 POLD1P28340 1107 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 KIF22Q14807 665 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 LRRC41Q15345 812 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 RAPH1Q70E73 1250 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 ARPINQ7Z6K5 226 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 NLRP10Q86W26 655 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 ERI1Q8IV48 349 aaKnown RBP12.67□□□□□ -0.38
CAPN3-221ENST00000638141 BBOF1Q8ND07 529 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 VTI1AQ96AJ9 217 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 ARPC5LQ9BPX5 153 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 ARPP21Q9UBL0 812 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-221ENST00000638141 ALG6Q9Y672 507 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 TBC1D12O60347 775 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 MTA2O94776 668 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 ACTN1P12814 892 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 TNIP1Q15025 636 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 CALCRLQ16602 461 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 NADK2Q4G0N4 442 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 SFT2D3Q587I9 215 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 NEPROQ6NW34 567 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 AHI1Q8N157 1196 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 ZFP28Q8NHY6 868 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 CCT7Q99832 543 aa12.67□□□□□ -0.38
CAPN3-221ENST00000638141 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-221ENST00000638141 NACA2Q9H009 215 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms