RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CYBBP04839 570 aa20.2■□□□□ 0.82
CACNA1A-257ENST00000638009 PSMD4P55036 377 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 NFIL3Q16649 462 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 SLFN13Q68D06 897 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ULK2Q8IYT8 1036 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 KLHL4Q9C0H6 718 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ARHGEF38Q9NXL2 777 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ARSEP51690 589 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 RAD23AP54725 363 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 CCDC80Q76M96 950 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 LINC00523Q86TU6 105 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 UNC45BQ8IWX7 931 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 LRRC47Q8N1G4 583 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 KANSL2Q9H9L4 492 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 TRPM5Q9NZQ8 1165 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 LRIG3Q6UXM1 1119 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 OOSP2Q86WS3 158 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ZNF507Q8TCN5 953 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 IDH3BO43837 385 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 FAM83EQ2M2I3 478 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ZNF483Q8TF39 744 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 FAM192AQ9GZU8 254 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 CDK17Q00537 523 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 LRRC36Q1X8D7 754 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 MZT2BQ6NZ67 158 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 FAM173BQ6P4H8 233 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 SLC10A4Q96EP9 437 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 DCAF4L1Q3SXM0 396 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ZNF786Q8N393 782 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 C1orf50Q9BV19 199 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ACAD9Q9H845 621 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 DISP3Q9P2K9 1392 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 CCDC189A1A4V9 331 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 APRTP07741 180 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 ATL2Q8NHH9 583 aa20.19■□□□□ 0.82
CACNA1A-257ENST00000638009 PLCG1P19174 1290 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 GUCY1A2P33402 732 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 SOAT1P35610 550 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 IFNGR2P38484 337 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 ARMC6Q6NXE6 501 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 GNA15P30679 374 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 DPCR1Q3MIW9 517 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 TTLL9Q3SXZ7 439 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 BDH2Q9BUT1 245 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 ADAMTS1Q9UHI8 967 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 SMCO3A2RU48 225 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 RNMTO43148 476 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 HPGDP15428 266 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 C10orf53Q8N6V4 93 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 GPKOWQ92917 476 aaPredicted RBP eCLIP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 C18orf25Q96B23 403 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 STN1Q9H668 368 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 KLHL41O60662 606 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 SERPIND1P05546 499 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 ARHGEF7Q14155 803 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 MACC1Q6ZN28 852 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 SPRP35270 261 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 TGM3Q08188 693 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 NSL1Q96IY1 281 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 DBNDD2Q9BQY9 259 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 YIPF2Q9BWQ6 316 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 VTI1BQ9UEU0 232 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 CCNL1Q9UK58 526 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 POLBP06746 335 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 AKT1P31749 480 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 AGBL2Q5U5Z8 902 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 CC2D1AQ6P1N0 951 aaPredicted RBP20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 TMC4Q7Z404 712 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 SNX31Q8N9S9 440 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 CYP39A1Q9NYL5 469 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 MTMR6Q9Y217 621 aa20.18■□□□□ 0.82
CACNA1A-257ENST00000638009 EIF2S3P41091 472 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 ZNF200P98182 395 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 FCHO2Q0JRZ9 810 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 DFFAO00273 331 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 ATP6V1B1P15313 513 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 SP100P23497 879 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 BNC1Q01954 994 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 CYP51A1Q16850 503 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 BTN3A3O00478 584 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 FEN1P39748 380 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 POLIQ9UNA4 740 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 MMGT1Q8N4V1 131 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 PJA1Q8NG27 643 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 CCT8L2Q96SF2 557 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 EAPPQ56P03 285 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 GPT2Q8TD30 523 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 SCFD2Q8WU76 684 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 ARHGEF26Q96DR7 871 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 C8orf37Q96NL8 207 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 PIDD1Q9HB75 910 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 SPASTQ9UBP0 616 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 GRID1Q9ULK0 1009 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 DENND3A2RUS2 1198 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 UHRF1BP1LA0JNW5 1464 aa20.17■□□□□ 0.82
CACNA1A-257ENST00000638009 PRXQ9BXM0 1461 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms