RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.54■□□□□ 0.56
CLN6-218ENST00000637223 HIDE1A8MVS5 230 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 TRAPPC3O43617 180 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 PHACTR2O75167 634 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 CXCL14O95715 111 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 TKTP29401 623 aaKnown RBP18.54■□□□□ 0.56
CLN6-218ENST00000637223 GCLMP48507 274 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 GLUD2P49448 558 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 TAF6P49848 677 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 LILRA4P59901 499 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 BIRC3Q13489 604 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 SMC1AQ14683 1233 aaKnown RBP18.54■□□□□ 0.56
CLN6-218ENST00000637223 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
CLN6-218ENST00000637223 PTPN14Q15678 1187 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 USP41Q3LFD5 358 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 DCAF17Q5H9S7 520 aaPredicted RBP18.54■□□□□ 0.56
CLN6-218ENST00000637223 RTP2Q5QGT7 225 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 TCERG1LQ5VWI1 586 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 TDRD10Q5VZ19 366 aaKnown RBP18.54■□□□□ 0.56
CLN6-218ENST00000637223 DSTYKQ6XUX3 929 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 ADGRD2Q7Z7M1 963 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 SUSD3Q96L08 255 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 ZNF560Q96MR9 790 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 TTPALQ9BTX7 342 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 CHST7Q9NS84 486 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 R3HCC1Q9Y3T6 440 aaKnown RBP18.54■□□□□ 0.56
CLN6-218ENST00000637223 PLXNA4Q9HCM2 1894 aa18.54■□□□□ 0.56
CLN6-218ENST00000637223 LETM1O95202 739 aaPredicted RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 FGFR1OPO95684 399 aaKnown RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 C4BPAP04003 597 aaKnown RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 ANK1P16157 1881 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 AARSP49588 968 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLN6-218ENST00000637223 AP3M2P53677 418 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 DSG1Q02413 1049 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 PPP3CAQ08209 521 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 TCEAL5Q5H9L2 206 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 CT47A1Q5JQC4 288 aaPredicted RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 PDE12Q6L8Q7 609 aaKnown RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 FRMD5Q7Z6J6 570 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 LRRC52Q8N7C0 313 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 MRPL43Q8N983 215 aaKnown RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 RIN2Q8WYP3 895 aaPredicted RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 NSUN3Q9H649 340 aaKnown RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 METTL14Q9HCE5 456 aaKnown RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 MRPL17Q9NRX2 175 aaKnown RBP18.53■□□□□ 0.56
CLN6-218ENST00000637223 COG5Q9UP83 839 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 TRIP11Q15643 1979 aa18.53■□□□□ 0.56
CLN6-218ENST00000637223 PDCD11Q14690 1871 aaKnown RBP18.52■□□□□ 0.56
CLN6-218ENST00000637223 C2orf71A6NGG8 1288 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 IKBKBO14920 756 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 CST3P01034 146 aaPredicted RBP18.52■□□□□ 0.56
CLN6-218ENST00000637223 FGFR3P22607 806 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 PNPLA4P41247 253 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 ENPEPQ07075 957 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 TRPC3Q13507 836 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 ZSCAN23Q3MJ62 389 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 SV2CQ496J9 727 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 KIAA0319Q5VV43 1072 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 PRSS55Q6UWB4 352 aaPredicted RBP18.52■□□□□ 0.56
CLN6-218ENST00000637223 SV2AQ7L0J3 742 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 RBM23Q86U06 439 aaKnown RBP18.52■□□□□ 0.56
CLN6-218ENST00000637223 CREBRFQ8IUR6 639 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 HPDLQ96IR7 371 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 SENP8Q96LD8 212 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 PCDHB8Q9UN66 801 aa18.52■□□□□ 0.56
CLN6-218ENST00000637223 TIMM13Q9Y5L4 95 aaPredicted RBP18.52■□□□□ 0.56
CLN6-218ENST00000637223 KPNA7A9QM74 516 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 M0QZQ0 153 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 PER2O15055 1255 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 CLSTN1O94985 981 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 GNA14O95837 355 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 CCDC192P0DO97 292 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 NRIP1P48552 1158 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 MYL6P60660 151 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 ZACNQ401N2 412 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 ANO6Q4KMQ2 910 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 HSP90AA4PQ58FG1 418 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
CLN6-218ENST00000637223 FUCA2Q9BTY2 467 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 IGFLR1Q9H665 355 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 TLE6Q9H808 572 aa18.51■□□□□ 0.55
CLN6-218ENST00000637223 XIRP2A4UGR9 3374 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 MUC6Q6W4X9 2439 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 PIEZO1Q92508 2521 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 CYB561D2O14569 222 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 SYN3O14994 580 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 STX10O60499 249 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 LILRB3O75022 631 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 VNN1O95497 513 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 RPL17P18621 184 aaKnown RBP18.5■□□□□ 0.55
CLN6-218ENST00000637223 GTF2F1P35269 517 aaKnown RBP eCLIP18.5■□□□□ 0.551e-6■■■■□ 26
CLN6-218ENST00000637223 MCCD1P59942 119 aaPredicted RBP18.5■□□□□ 0.55
CLN6-218ENST00000637223 MYO1EQ12965 1108 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 NCOA4Q13772 614 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 PSMD5Q16401 504 aa18.5■□□□□ 0.55
CLN6-218ENST00000637223 VARS2Q5ST30 1063 aaKnown RBP18.5■□□□□ 0.55
CLN6-218ENST00000637223 C15orf39Q6ZRI6 1047 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms