RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SPTLC1O15269 473 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 GRM6O15303 877 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 PMM2O15305 246 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 TRAPPC3O43617 180 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 N4BP1O75113 896 aaKnown RBP17.22■□□□□ 0.35
CLN6-216ENST00000636876 PIK3CAP42336 1068 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 BRCC3P46736 316 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 MYL6P60660 151 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 MYL7Q01449 175 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 KRT31Q15323 416 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 TIGD5Q53EQ6 642 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 TAS1R2Q8TE23 839 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 POF1BQ8WVV4 589 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 HPDLQ96IR7 371 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 SUSD3Q96L08 255 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 ANP32EQ9BTT0 268 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 HERC2P3Q9BVR0 1158 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 XYLT2Q9H1B5 865 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
CLN6-216ENST00000636876 COQ4Q9Y3A0 265 aa17.22■□□□□ 0.35
CLN6-216ENST00000636876 RFXAPO00287 272 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 P4HA2O15460 535 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 STAU1O95793 577 aaKnown RBP17.21■□□□□ 0.35
CLN6-216ENST00000636876 SOD2P04179 222 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 PRKCSHP14314 528 aaPredicted RBP17.21■□□□□ 0.35
CLN6-216ENST00000636876 CDK11BP21127 795 aaKnown RBP17.21■□□□□ 0.35
CLN6-216ENST00000636876 DNAJB1P25685 340 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 ATICP31939 592 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 TAS1R1Q7RTX1 841 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 VPS52Q8N1B4 723 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 FBXL13Q8NEE6 735 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 FAM161BQ96MY7 647 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 LMAN2LQ9H0V9 348 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 TAB2Q9NYJ8 693 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
CLN6-216ENST00000636876 EYSQ5T1H1 3165 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 COL4A4P53420 1690 aaPredicted RBP17.2■□□□□ 0.34
CLN6-216ENST00000636876 MYO7AQ13402 2215 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 KPNA7A9QM74 516 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 M0QZQ0 153 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 ATP1A3P13637 1013 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 TPM4P67936 248 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 GRIN2CQ14957 1233 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 SGSM1Q2NKQ1 1148 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 ZNF699Q32M78 642 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 USP41Q3LFD5 358 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 VWA3BQ502W6 1294 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 MIIPQ5JXC2 388 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 FAM171A1Q5VUB5 890 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.2■□□□□ 0.34
CLN6-216ENST00000636876 TAF4BQ92750 862 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 SEMA4DQ92854 862 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 SENP8Q96LD8 212 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 ZBP1Q9H171 429 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 NDST4Q9H3R1 872 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 PRDM12Q9H4Q4 367 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 VRTNQ9H8Y1 702 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 TLR9Q9NR96 1032 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 RAB20Q9NX57 234 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 GDAP2Q9NXN4 497 aa17.2■□□□□ 0.34
CLN6-216ENST00000636876 CDH23Q9H251 3354 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 ARHGEF37A1IGU5 675 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 SYN3O14994 580 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 LPXNO60711 386 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 ASS1P00966 412 aaKnown RBP17.19■□□□□ 0.34
CLN6-216ENST00000636876 TPM2P07951 284 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 FGFR3P22607 806 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 TKTP29401 623 aaKnown RBP17.19■□□□□ 0.34
CLN6-216ENST00000636876 CETN1Q12798 172 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 CAMK1Q14012 370 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 IMPG2Q9BZV3 1241 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 VPS16Q9H269 839 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 CHST7Q9NS84 486 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 VWA8A3KMH1 1905 aa17.19■□□□□ 0.34
CLN6-216ENST00000636876 LRRC10BA6NIK2 292 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 PES1O00541 588 aaKnown RBP17.18■□□□□ 0.34
CLN6-216ENST00000636876 CYB561D2O14569 222 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 FSCN2O14926 492 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 LRRN2O75325 713 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 URODP06132 367 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 CTSAP10619 480 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 ODC1P11926 461 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 GLUD2P49448 558 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 COPB1P53618 953 aaKnown RBP17.18■□□□□ 0.34
CLN6-216ENST00000636876 ERVFC1P60507 584 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 DSG1Q02413 1049 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 WDR72Q3MJ13 1102 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 ZNF667Q5HYK9 610 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 RTP2Q5QGT7 225 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 APTXQ7Z2E3 356 aaKnown RBP17.18■□□□□ 0.34
CLN6-216ENST00000636876 TMC7Q7Z402 723 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 CEP57Q86XR8 500 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 RNF214Q8ND24 703 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 APPL2Q8NEU8 664 aa17.18■□□□□ 0.34
CLN6-216ENST00000636876 ELMO3Q96BJ8 720 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms