RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 VAMP7P51809 220 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 GUCY2FP51841 1108 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 ITIH3Q06033 890 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 ENPEPQ07075 957 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 BIRC3Q13489 604 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 MORC3Q14149 939 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 TPD52L1Q16890 204 aaPredicted RBP8.86□□□□□ -0.99
PNKP-226ENST00000636840 UVSSAQ2YD98 709 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 CTXN3Q4LDR2 81 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 ATAT1Q5SQI0 421 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 VARS2Q5ST30 1063 aaKnown RBP8.86□□□□□ -0.99
PNKP-226ENST00000636840 KLHL10Q6JEL2 608 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 ANKRD54Q6NXT1 300 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 CYP26C1Q6V0L0 522 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 CCDC149Q6ZUS6 474 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 TRAPPC11Q7Z392 1133 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 GLYCTKQ8IVS8 523 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 EFCAB13Q8IY85 973 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 SMYD4Q8IYR2 804 aaPredicted RBP8.86□□□□□ -0.99
PNKP-226ENST00000636840 MLKLQ8NB16 471 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 CCDC150Q8NCX0 1101 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 ZSWIM2Q8NEG5 633 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 PARD3BQ8TEW8 1205 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 SYAP1Q96A49 352 aaPredicted RBP8.86□□□□□ -0.99
PNKP-226ENST00000636840 ASB2Q96Q27 587 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 CGRRF1Q99675 332 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 MKNK1Q9BUB5 465 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 VN1R3Q9BXE9 311 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 DNAI2Q9GZS0 605 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 METTL14Q9HCE5 456 aaKnown RBP8.86□□□□□ -0.99
PNKP-226ENST00000636840 MTRRQ9UBK8 725 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 MAFFQ9ULX9 164 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 HCFC2Q9Y5Z7 792 aa8.86□□□□□ -0.99
PNKP-226ENST00000636840 PLXNA4Q9HCM2 1894 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 KIAA1671Q9BY89 1806 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 H3BQ06 376 aaPredicted RBP8.85□□□□□ -0.99
PNKP-226ENST00000636840 I3L4J1 428 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 LINC01565O15544 149 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 OAZ2O95190 189 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 GNA14O95837 355 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 P4HA1P13674 534 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 CPB1P15086 417 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 TRIM21P19474 475 aaKnown RBP8.85□□□□□ -0.99
PNKP-226ENST00000636840 ATICP31939 592 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 MTHFRP42898 656 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 LHX1P48742 406 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 AARSP49588 968 aaKnown RBP eCLIP8.85□□□□□ -0.99
PNKP-226ENST00000636840 CLCN4P51793 760 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 ARPP19P56211 112 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 SMARCB1Q12824 385 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 BFSP1Q12934 665 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 PAK1Q13153 545 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 RAB33AQ14088 237 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 MRPL58Q14197 206 aaKnown RBP8.85□□□□□ -0.99
PNKP-226ENST00000636840 COL19A1Q14993 1142 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 SGSM1Q2NKQ1 1148 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 CT47A1Q5JQC4 288 aaPredicted RBP8.85□□□□□ -0.99
PNKP-226ENST00000636840 RTP2Q5QGT7 225 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 LIN9Q5TKA1 542 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 TPGS2Q68CL5 300 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 LMBRD2Q68DH5 695 aaPredicted RBP8.85□□□□□ -0.99
PNKP-226ENST00000636840 ANKRD40Q6AI12 368 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 OVOS1Q6IE37 1185 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 PTCRAQ6ISU1 281 aaPredicted RBP8.85□□□□□ -0.99
PNKP-226ENST00000636840 FOXR2Q6PJQ5 311 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 PRSS55Q6UWB4 352 aaPredicted RBP8.85□□□□□ -0.99
PNKP-226ENST00000636840 CD300LGQ6UXG3 332 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 FILIP1Q7Z7B0 1213 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 TMEM86AQ8N2M4 240 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 C1orf127Q8N9H9 656 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 KREMEN2Q8NCW0 462 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 C3orf58Q8NDZ4 430 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 ZNF461Q8TAF7 563 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 SLC22A17Q8WUG5 538 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 NELFBQ8WX92 580 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 HPDLQ96IR7 371 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 B3GALT6Q96L58 329 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 RIPOR3Q96MK2 946 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 CEP63Q96MT8 703 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 MMS19Q96T76 1030 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 CLSTN3Q9BQT9 956 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 IMPG2Q9BZV3 1241 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 MTMR12Q9C0I1 747 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 PIDD1Q9HB75 910 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 BRWD1Q9NSI6 2320 aa8.85□□□□□ -0.99
PNKP-226ENST00000636840 GRXCR2A6NFK2 248 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 PPP1R3GB7ZBB8 358 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 SLC16A3O15427 465 aaKnown RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 TGM5O43548 720 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 XYLBO75191 536 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 CST3P01034 146 aaPredicted RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 CYP11A1P05108 521 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 EPCAMP16422 314 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 RPL17P18621 184 aaKnown RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 GTF2H1P32780 548 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 LTBRP36941 435 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 CASP4P49662 377 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms