RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 DDX12PQ92771 950 aa11.4□□□□□ -0.58
CHD2-223ENST00000636306 HNRNPABQ99729 332 aaKnown RBP11.4□□□□□ -0.58
CHD2-223ENST00000636306 ECSITQ9BQ95 431 aa11.4□□□□□ -0.58
CHD2-223ENST00000636306 TRIM51Q9BSJ1 452 aa11.4□□□□□ -0.58
CHD2-223ENST00000636306 PODXLO00592 558 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 P4HA2O15460 535 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 AP1G1O43747 822 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 CBFA2T3O75081 653 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 TBX10O75333 385 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 POLR2MP0CAP2 368 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 MUTP22033 750 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 EMP3P54852 163 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 XIAPP98170 497 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 PLCB3Q01970 1234 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 STK4Q13043 487 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 MOGSQ13724 837 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 LRRC14Q15048 493 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 MAP7D1Q3KQU3 841 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 ACSBG2Q5FVE4 666 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 FAM26FQ5R3K3 315 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 TMEM53Q6P2H8 277 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 Q6ZNX1 250 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 DAAM2Q86T65 1068 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 ARHGAP24Q8N264 748 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 KIAA0895Q8NCT3 520 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 TPCN2Q8NHX9 752 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 FNDC8Q8TC99 324 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 MGARPQ8TDB4 240 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 LRRC15Q8TF66 581 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 SNX27Q96L92 541 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 CEP63Q96MT8 703 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 BTBD10Q9BSF8 475 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 DBR1Q9UK59 544 aaKnown RBP11.39□□□□□ -0.59
CHD2-223ENST00000636306 COL4A5P29400 1685 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 hCG_2014768A0A024R1R8 64 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 SMIM23A6NLE4 172 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 E9PBE3 544 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 PLA2G4BP0C869 781 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 ETS2P15036 469 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 NAT1P18440 290 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 CAP2P40123 477 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 NEK2P51955 445 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 COASYQ13057 564 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 PRR16Q569H4 304 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 THOC7Q6I9Y2 204 aaKnown RBP11.39□□□□□ -0.59
CHD2-223ENST00000636306 DYMQ7RTS9 669 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 PEX26Q7Z412 305 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 ADGRG6Q86SQ4 1221 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 GPBP1Q86WP2 473 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 BBS5Q8N3I7 341 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 ETNPPLQ8TBG4 499 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 LPAR1Q92633 364 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 CELF4Q9BZC1 486 aaKnown RBP11.39□□□□□ -0.59
CHD2-223ENST00000636306 KCNK9Q9NPC2 374 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 LGALS13Q9UHV8 139 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 EFR3BQ9Y2G0 817 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 FADS3Q9Y5Q0 445 aa11.39□□□□□ -0.59
CHD2-223ENST00000636306 DOCK1Q14185 1865 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 A6NJR5 290 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 EDIL3O43854 480 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 TLR2O60603 784 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 CDK4P11802 303 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 FCER1AP12319 257 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 RPA1P27694 616 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 PLTPP55058 493 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 INAQ16352 499 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 ASIC2Q16515 512 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 ZNF568Q3ZCX4 644 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 SH3D19Q5HYK7 790 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 FAM83BQ5T0W9 1011 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 TCERG1LQ5VWI1 586 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 KBTBD2Q8IY47 623 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 GAB3Q8WWW8 586 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 HES6Q96HZ4 224 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 ZBED3Q96IU2 234 aaPredicted RBP11.38□□□□□ -0.59
CHD2-223ENST00000636306 DDX50Q9BQ39 737 aaKnown RBP11.38□□□□□ -0.59
CHD2-223ENST00000636306 CADM1Q9BY67 442 aaKnown RBP11.38□□□□□ -0.59
CHD2-223ENST00000636306 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 PFDN4Q9NQP4 134 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 GRHL1Q9NZI5 618 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 THEGQ9P2T0 379 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 DNM3Q9UQ16 869 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 LTBP3Q9NS15 1303 aa11.38□□□□□ -0.59
CHD2-223ENST00000636306 A0A1W2PRG0 241 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 MATN2O00339 956 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 C2CD2LO14523 706 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 NDC80O14777 642 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 GSC2O15499 205 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 BRAFP15056 766 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 SLC18A1P54219 525 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 FKBP3Q00688 224 aaKnown RBP11.37□□□□□ -0.59
CHD2-223ENST00000636306 SHROOM1Q2M3G4 852 aaPredicted RBP11.37□□□□□ -0.59
CHD2-223ENST00000636306 CCDC153Q494R4 210 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 RFWD3Q6PCD5 774 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 ARL10Q8N8L6 244 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 ANKRD42Q8N9B4 389 aa11.37□□□□□ -0.59
CHD2-223ENST00000636306 SNRNP27Q8WVK2 155 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms