RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 FERMT2Q96AC1 680 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 EDC3Q96F86 508 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 CCDC34Q96HJ3 373 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 SEC62Q99442 399 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 PUS3Q9BZE2 481 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 ANKRD2Q9GZV1 360 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 NAPBQ9H115 298 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 NUP62CLQ9H1M0 184 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 MS4A5Q9H3V2 200 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 ZCCHC4Q9H5U6 513 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 PARD6AQ9NPB6 346 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 USP40Q9NVE5 1235 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 Q9UFV3 132 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 USP25Q9UHP3 1055 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 DENND2AQ9ULE3 1009 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 NOL7Q9UMY1 257 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 NIP7Q9Y221 180 aaKnown RBP eCLIP2.96□□□□□ -1.94
CD46-219ENST00000636114 CNPY2Q9Y2B0 182 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 NOC2LQ9Y3T9 749 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 NWD2Q9ULI1 1742 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 SLIT2O94813 1529 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 TJP1Q07157 1748 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 TOGARAM1Q9Y4F4 1720 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 PDS5AQ29RF7 1337 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 PRC1O43663 620 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 RPS6KA4O75676 772 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 IDH1O75874 414 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 CAMTA2O94983 1202 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 LARGE1O95461 756 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 YEATS4O95619 227 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 HMGCRP04035 888 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 CALM1P0DP23 149 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 CALM2P0DP24 149 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 CALM3P0DP25 149 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 CPA1P15085 419 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 MCAMP43121 646 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 KCNQ1P51787 676 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 STK3Q13188 491 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 USP10Q14694 798 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 ADALQ6DHV7 355 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 MFSD6Q6ZSS7 791 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 BMP8AQ7Z5Y6 402 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 SGMS1Q86VZ5 419 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 CXorf67Q86X51 503 aaPredicted RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 NECAB1Q8N987 351 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 NSUN7Q8NE18 718 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 OR5AN1Q8NGI8 311 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 BICD2Q8TD16 824 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 KCNG4Q8TDN1 519 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 MBD6Q96DN6 1003 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 PANK2Q9BZ23 570 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 PITHD1Q9GZP4 211 aaPredicted RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 NAT10Q9H0A0 1025 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 PUS7LQ9H0K6 701 aaKnown RBP2.96□□□□□ -1.94
CD46-219ENST00000636114 TNMDQ9H2S6 317 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 SEMA4AQ9H3S1 761 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 MTG2Q9H4K7 406 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 KCNG1Q9UIX4 513 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 RCOR1Q9UKL0 485 aa2.96□□□□□ -1.94
CD46-219ENST00000636114 ITGB4P16144 1822 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 ANKRD36CQ5JPF3 1778 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 COL16A1Q07092 1604 aaPredicted RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 LTBP4Q8N2S1 1624 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 UBN2Q6ZU65 1347 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 ZNF532Q9HCE3 1301 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 SALL1Q9NSC2 1324 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 LCHNA4D1U4 455 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 CCDC69A6NI79 296 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 ZNF500O60304 480 aaPredicted RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 NTSR2O95665 410 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 PTMAP06454 111 aaKnown RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 SLC3A2P08195 630 aaKnown RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 CDK11BP21127 795 aaKnown RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 CSF2RBP32927 897 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 CDKN1CP49918 316 aaPredicted RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 METAP2P50579 478 aaKnown RBP eCLIP2.95□□□□□ -1.94
CD46-219ENST00000636114 MANFP55145 182 aaKnown RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 TPM4P67936 248 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 ST3GAL1Q11201 340 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 SAFBQ15424 915 aaKnown RBP eCLIP2.95□□□□□ -1.94
CD46-219ENST00000636114 ZRSR1Q15695 479 aaKnown RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 DGKDQ16760 1214 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 CCDC178Q5BJE1 867 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 ZMAT1Q5H9K5 638 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 ZBTB41Q5SVQ8 909 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 AKNAD1Q5T1N1 836 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 SPTY2D1Q68D10 685 aaPredicted RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 CCDC73Q6ZRK6 1079 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 CCDC129Q6ZRS4 1044 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 RBM43Q6ZSC3 357 aaKnown RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 GPR155Q7Z3F1 870 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 KBTBD2Q8IY47 623 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 MB21D2Q8IYB1 491 aaPredicted RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 ELOA2Q8IYF1 753 aaPredicted RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 LGI4Q8N135 537 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 PRPF38AQ8NAV1 312 aaKnown RBP2.95□□□□□ -1.94
CD46-219ENST00000636114 FBXO18Q8NFZ0 1043 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 FEZF2Q8TBJ5 459 aa2.95□□□□□ -1.94
CD46-219ENST00000636114 C8orf76Q96K31 380 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms