RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GJC1P36383 396 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 RRP1BQ14684 758 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PLCB4Q15147 1175 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CELF3Q5SZQ8 465 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 DRICH1Q6PGQ1 229 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 RHPN2Q8IUC4 686 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PALM2Q8IXS6 379 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 HELQQ8TDG4 1101 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PPP1R2P1Q96PQ5 205 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ATP9AO75110 1047 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KRT14P02533 472 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KRT15P19012 456 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SDC4P31431 198 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 FMO1Q01740 532 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KRT81Q14533 505 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PDK2Q15119 407 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 HHATQ5VTY9 493 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 GJB7Q6PEY0 223 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 NOP9Q86U38 636 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CCNJLQ8IV13 435 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CDKL2Q92772 493 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CHMP6Q96FZ7 201 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 FGFBP2Q9BYJ0 223 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 LHX5Q9H2C1 402 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 GPRC5CQ9NQ84 441 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PACSIN2Q9UNF0 486 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KCNH4Q9UQ05 1017 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 STXBP5LQ9Y2K9 1186 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 IQANK1A0A1B0GTG1 560 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 GLI1P08151 1106 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ABHD2P08910 425 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ARL4AP40617 200 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ERVK-9P63128 1117 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 EMC10Q5UCC4 262 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 C10orf67Q8IYJ2 551 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ATP11CQ8NB49 1132 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 REPS2Q8NFH8 660 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ATP2A3Q93084 1043 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SMC6Q96SB8 1091 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KCNK9Q9NPC2 374 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 COL20A1Q9P218 1284 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 C2CD2Q9Y426 696 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 DLEC1Q9Y238 1755 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 IRF6O14896 467 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PPP1R12AO14974 1030 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 B4GALT4O60513 344 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 NEBLO76041 1014 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 TROVE2P10155 538 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KCNA1Q09470 495 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 NFX1Q12986 1120 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PTK6Q13882 451 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CYP1B1Q16678 543 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 C6orf163Q5TEZ5 329 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 UNC93AQ86WB7 457 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 NLRP4Q96MN2 994 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ELP3Q9H9T3 547 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PCDHGC3Q9UN70 934 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ANKRD63C9JTQ0 380 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 FARP2O94887 1054 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ASS1P00966 412 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CYP1A1P04798 512 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ADRB2P07550 413 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ACOT2P49753 483 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 DGKDQ16760 1214 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ARHGAP24Q8N264 748 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KLC2Q9H0B6 622 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 OSGEPQ9NPF4 335 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SLC38A7Q9NVC3 462 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 TXNDC16Q9P2K2 825 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 MID2Q9UJV3 735 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 NOCTQ9UK39 431 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 TPX2Q9ULW0 747 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 STAP1Q9ULZ2 295 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SHOC2Q9UQ13 582 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 STAU1O95793 577 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PSMC1P62191 440 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 KRT17Q04695 432 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ARHGEF6Q15052 776 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 DUPD1Q68J44 220 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 IQSEC1Q6DN90 963 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CATSPER4Q7RTX7 472 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ZBTB33Q86T24 672 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 MS4A14Q96JA4 679 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 SNX25Q9H3E2 840 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 VPS37BQ9H9H4 285 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 CYLDQ9NQC7 956 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 VIMP08670 466 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 GSTA2P09210 222 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 JAG1P78504 1218 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 MORF4L2Q15014 288 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 PLEKHA7Q6IQ23 1121 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 TMC3Q7Z5M5 1100 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 MICALL1Q8N3F8 863 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ZFP91Q96JP5 570 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 NT5C1AQ9BXI3 368 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 ZCCHC17Q9NP64 241 aaKnown RBP4.82□□□□□ -1.64
SCN1A-210ENST00000635776 NENFQ9UMX5 172 aa4.82□□□□□ -1.64
SCN1A-210ENST00000635776 QSER1Q2KHR3 1735 aa4.81□□□□□ -1.64
SCN1A-210ENST00000635776 ESYT3A0FGR9 886 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms