RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 C1QTNF7Q9BXJ2 289 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 REXO4Q9GZR2 422 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 HSPBP1Q9NZL4 362 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CEP72Q9P209 647 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 TUBGCP4Q9UGJ1 667 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CDYLQ9Y232 598 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 A0A1W2PQ27 194 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 A0A1W2PQ64 194 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 A0A1W2PQD8 194 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 KIAA0391O15091 583 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GCLMP48507 274 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ARFIP2P53365 341 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF177Q13360 481 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 DGKDQ16760 1214 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 C10orf120Q5SQS8 335 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 UNC13DQ70J99 1090 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CYFIP1Q7L576 1253 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 UNC5CLQ8IV45 518 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 P3H2Q8IVL5 708 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF280CQ8ND82 737 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SCFD2Q8WU76 684 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 TRIT1Q9H3H1 467 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GPR108Q9NPR9 543 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PLEKHG2Q9H7P9 1386 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 MICAL3Q7RTP6 2002 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 VWA5AO00534 786 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 HOXA2O43364 376 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 HAUS5O94927 633 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 IL18RAPO95256 599 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 HNMTP50135 292 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SPP2Q13103 211 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 BEND6Q5SZJ8 279 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CDK20Q8IZL9 346 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ATP6V0D2Q8N8Y2 350 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ASZ1Q8WWH4 475 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ATP6V1HQ9UI12 483 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 LZTS1Q9Y250 596 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 NCKAP1Q9Y2A7 1128 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PCDHB12Q9Y5F1 795 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 TMEM191CA6NGB0 347 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 IFRD1O00458 451 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 AKAP10O43572 662 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 NDUFA10O95299 355 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ASS1P00966 412 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SLC2A3P11169 496 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PLA2G4AP47712 749 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CCT8P50990 548 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 HIC1Q14526 733 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 RCN1Q15293 331 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 EDRF1Q3B7T1 1238 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 SGO1Q5FBB7 561 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 AGR3Q8TD06 166 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CSGALNACT1Q8TDX6 532 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 DCDC2Q9UHG0 476 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ANAPC2Q9UJX6 822 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 POLR1DQ9Y2S0 133 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 DYRK1BQ9Y463 629 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GPATCH8Q9UKJ3 1502 aaKnown RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 MYOM2P54296 1465 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ZBTB7AO95365 584 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 ODC1P11926 461 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 POU4F1Q01851 419 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 TAF13Q15543 124 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 C11orf74Q86VG3 221 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 GLYCTKQ8IVS8 523 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 INPP5DQ92835 1189 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 CLMNQ96JQ2 1002 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 OSBPL9Q96SU4 736 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 DCTN4Q9UJW0 460 aa5.81□□□□□ -1.48
SCN1A-209ENST00000635750 EEF2KO00418 725 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 S100GP29377 79 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PLD1Q13393 1074 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ORC2Q13416 577 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SLC44A4Q53GD3 710 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 HOMEZQ8IX15 550 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 FAM9CQ8IZT9 166 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 RNF25Q96BH1 459 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 GRAMD1AQ96CP6 724 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 C18orf8Q96DM3 657 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 EDC3Q96F86 508 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 THOC1Q96FV9 657 aaKnown RBP5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PANX2Q96RD6 677 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 NEK6Q9HC98 313 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 TMCC3Q9ULS5 477 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PLA2G4CQ9UP65 541 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 KIAA0232Q92628 1395 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ARAP3Q8WWN8 1544 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 STRNO43815 780 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 PALMO75781 387 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CTSHP09668 335 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CHRM3P20309 590 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 SERPINB3P29508 390 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 STARD3Q14849 445 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 ZNF284Q2VY69 593 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CACHD1Q5VU97 1274 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 CHSY1Q86X52 802 aa5.8□□□□□ -1.48
SCN1A-209ENST00000635750 RNF149Q8NC42 400 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms