RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	PIN1	Q13526	163 aa	Predicted RBP	3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	BEAN1	Q3B7T3	259 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	CREB3L3	Q68CJ9	461 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	IQSEC1	Q6DN90	963 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	SYT12	Q8IV01	421 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	CMTM4	Q8IZR5	234 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	C2orf69	Q8N8R5	385 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	COG1	Q8WTW3	980 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	CHTF18	Q8WVB6	975 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	CAVIN3	Q969G5	261 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	ARL8A	Q96BM9	186 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	COQ10A	Q96MF6	247 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	GPR101	Q96P66	508 aa	Predicted RBP	3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	CHMP4A	Q9BY43	222 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	ENKD1	Q9H0I2	346 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	CDH19	Q9H159	772 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	SPTLC3	Q9NUV7	552 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	THG1L	Q9NWX6	298 aa	Known RBP	3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	TRPM5	Q9NZQ8	1165 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	EIF2B4	Q9UI10	523 aa	Known RBP	3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	DNAI1	Q9UI46	699 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	MYOM1	P52179	1685 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	NHS	Q6T4R5	1651 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	CPD	O75976	1380 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	EIF3A	Q14152	1382 aa	Known RBP	3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	PARD3	Q8TEW0	1356 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	SHANK3	Q9BYB0	1731 aa		3.22	□□□□□ -1.89
SMARCB1-208	ENST00000634926	TNKS	O95271	1327 aa		3.21	□□□□□ -1.89
SMARCB1-208	ENST00000634926	SPATA31A5	Q5VU36	1347 aa		3.21	□□□□□ -1.89
SMARCB1-208	ENST00000634926	SPATA31A7	Q8IWB4	1347 aa		3.21	□□□□□ -1.89
SMARCB1-208	ENST00000634926	TUBGCP6	Q96RT7	1819 aa		3.21	□□□□□ -1.89
SMARCB1-208	ENST00000634926	PIPSL	A2A3N6	862 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	HOXA3	O43365	443 aa	Predicted RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	RFPL1	O75677	317 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	RECQL4	O94761	1208 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	MAP4K4	O95819	1239 aa	Predicted RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	SCGB1D2	O95969	90 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	JUN	P05412	331 aa	Known RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	ZBTB48	P10074	688 aa	Predicted RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	GYPE	P15421	78 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	GNAT2	P19087	354 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	SDHA	P31040	664 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	ERVK-21	P61565	698 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	MAP3K12	Q12852	859 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	TP53BP2	Q13625	1128 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	TMEM132B	Q14DG7	1078 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	LRRC41	Q15345	812 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	INAVA	Q3KP66	663 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	KRT40	Q6A162	431 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	NXN	Q6DKJ4	435 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	CCSAP	Q6IQ19	270 aa	Predicted RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	EP400NL	Q6ZTU2	488 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	GRASP	Q7Z6J2	395 aa	Predicted RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	DEFB132	Q7Z7B7	95 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	ZBTB46	Q86UZ6	589 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	WDR75	Q8IWA0	830 aa	Known RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	CCAR1	Q8IX12	1150 aa	Known RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	CHPF	Q8IZ52	775 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	MYO1H	Q8N1T3	1032 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	CBARP	Q8N350	705 aa	Predicted RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	EFHB	Q8N7U6	833 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	CALML6	Q8TD86	181 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	ZNF384	Q8TF68	577 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	HOOK2	Q96ED9	719 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	SMAD5	Q99717	465 aa	Known RBP	3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	NDC1	Q9BTX1	674 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	BOC	Q9BWV1	1114 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	SLC13A1	Q9BZW2	595 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	AASDHPPT	Q9NRN7	309 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	OXSM	Q9NWU1	459 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	ZIM2	Q9NZV7	527 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	GABBR1	Q9UBS5	961 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	RAB3GAP2	Q9H2M9	1393 aa		3.21	□□□□□ -1.9
SMARCB1-208	ENST00000634926	RGPD5	Q99666	1765 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	SLC12A8	A0AV02	714 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	PPFIA4	O75335	1185 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	ABLIM3	O94929	683 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	HKR1	P10072	659 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	GNAL	P38405	381 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	KIR2DL3	P43628	341 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	NPEPPS	P55786	919 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	PHC1	P78364	1004 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	KRT85	P78386	507 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	SCAP	Q12770	1279 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	KLF1	Q13351	362 aa	Predicted RBP	3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	HLTF	Q14527	1009 aa	Known RBP eCLIP	3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	DDB1	Q16531	1140 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	PTPN21	Q16825	1174 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	GPR158	Q5T848	1215 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	FAM102B	Q5T8I3	360 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	ZNF425	Q6IV72	752 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	KRT28	Q7Z3Y7	464 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	GDF7	Q7Z4P5	450 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	CCDC146	Q8IYE0	955 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	TCEAL8	Q8IYN2	117 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	CLRN3	Q8NCR9	226 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	SLC5A5	Q92911	643 aa		3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	AHCYL2	Q96HN2	611 aa	Known RBP	3.2	□□□□□ -1.9
SMARCB1-208	ENST00000634926	FAM193B	Q96PV7	902 aa	Predicted RBP	3.2	□□□□□ -1.9

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