RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 LRRC59Q96AG4 307 aaKnown RBP4.63□□□□□ -1.67
CHD2-219ENST00000630016 PTCD3Q96EY7 689 aaKnown RBP4.63□□□□□ -1.67
CHD2-219ENST00000630016 RAX2Q96IS3 184 aa4.63□□□□□ -1.67
CHD2-219ENST00000630016 ACAP3Q96P50 834 aa4.63□□□□□ -1.67
CHD2-219ENST00000630016 FEZ1Q99689 392 aa4.63□□□□□ -1.67
CHD2-219ENST00000630016 TARS2Q9BW92 718 aaKnown RBP4.63□□□□□ -1.67
CHD2-219ENST00000630016 KCTD5Q9NXV2 234 aa4.63□□□□□ -1.67
CHD2-219ENST00000630016 DPP7Q9UHL4 492 aa4.63□□□□□ -1.67
CHD2-219ENST00000630016 MTO1Q9Y2Z2 717 aaKnown RBP4.63□□□□□ -1.67
CHD2-219ENST00000630016 ZC3H13Q5T200 1668 aaKnown RBP4.63□□□□□ -1.67
CHD2-219ENST00000630016 MTUS2Q5JR59 1369 aa4.63□□□□□ -1.67
CHD2-219ENST00000630016 CEP162Q5TB80 1403 aa4.63□□□□□ -1.67
CHD2-219ENST00000630016 CCDC141Q6ZP82 1450 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 IL2RBP14784 551 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 ATP5JP18859 108 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 PER3P56645 1201 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 FSCN1Q16658 493 aaKnown RBP4.62□□□□□ -1.67
CHD2-219ENST00000630016 CYP2A13Q16696 494 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD2-219ENST00000630016 ATP13A4Q4VNC1 1196 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 DHX37Q8IY37 1157 aaKnown RBP4.62□□□□□ -1.67
CHD2-219ENST00000630016 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD2-219ENST00000630016 GPR156Q8NFN8 814 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 FBXO18Q8NFZ0 1043 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 APPBP2Q92624 585 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 EAF2Q96CJ1 260 aaPredicted RBP4.62□□□□□ -1.67
CHD2-219ENST00000630016 UROC1Q96N76 676 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 LANCL2Q9NS86 450 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 ASB6Q9NWX5 421 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 USP25Q9UHP3 1055 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 PNPLA7Q6ZV29 1317 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 AATKQ6ZMQ8 1374 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 ERVK-7P63135 1459 aa4.62□□□□□ -1.67
CHD2-219ENST00000630016 PEX1O43933 1283 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 ATF3P18847 181 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 CTGFP29279 349 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 ZNF81P51508 661 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 VAV2P52735 878 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 KRTAP10-9P60411 292 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 CDK17Q00537 523 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 SRSF4Q08170 494 aaKnown RBP4.61□□□□□ -1.67
CHD2-219ENST00000630016 TKFCQ3LXA3 575 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 ZNF788Q6ZQV5 615 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 PTF1AQ7RTS3 328 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 GRASPQ7Z6J2 395 aaPredicted RBP4.61□□□□□ -1.67
CHD2-219ENST00000630016 SREK1Q8WXA9 508 aaKnown RBP4.61□□□□□ -1.67
CHD2-219ENST00000630016 C1QTNF7Q9BXJ2 289 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 SENP6Q9GZR1 1112 aaPredicted RBP4.61□□□□□ -1.67
CHD2-219ENST00000630016 UNKLQ9H9P5 680 aaKnown RBP4.61□□□□□ -1.67
CHD2-219ENST00000630016 USP35Q9P2H5 1018 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 ARPP21Q9UBL0 812 aaPredicted RBP4.61□□□□□ -1.67
CHD2-219ENST00000630016 PLAAQ9Y263 795 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 ATRNL1Q5VV63 1379 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 TET3O43151 1660 aa4.61□□□□□ -1.67
CHD2-219ENST00000630016 LOC105371045A0A1W2PR82 267 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 ENPP1P22413 925 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 UBXN2BQ14CS0 331 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 PQLC1Q8N2U9 271 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 LNX2Q8N448 690 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 SH2D3CQ8N5H7 860 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 SSH3Q8TE77 659 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 NACC2Q96BF6 587 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 MFSD3Q96ES6 412 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 FAM30AQ9NZY2 134 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 EDARQ9UNE0 448 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 SIK3Q9Y2K2 1263 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 KANK1Q14678 1352 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 DCCP43146 1447 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 SETD5Q9C0A6 1442 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 COL3A1P02461 1466 aaPredicted RBP4.6□□□□□ -1.67
CHD2-219ENST00000630016 ARHGEF5Q12774 1597 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 EIF2AK4Q9P2K8 1649 aaKnown RBP4.6□□□□□ -1.67
CHD2-219ENST00000630016 STRCP1A6NGW2 1772 aa4.6□□□□□ -1.67
CHD2-219ENST00000630016 TRGV11A0A075B6L2 103 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 TEX33O43247 280 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 ULK1O75385 1050 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 ALAS1P13196 640 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 GPD1P21695 349 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 SREBF1P36956 1147 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 ALDH1A3P47895 512 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 CCT2P78371 535 aaKnown RBP4.59□□□□□ -1.67
CHD2-219ENST00000630016 IDI1Q13907 227 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 PDCD1Q15116 288 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 OTUD7BQ6GQQ9 843 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 ZNF529Q6P280 563 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 Q6ZVL8 140 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 C1QL2Q7Z5L3 287 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 UBR1Q8IWV7 1749 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 AUTS2Q8WXX7 1259 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 USP7Q93009 1102 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 RNPC3Q96LT9 517 aaKnown RBP4.59□□□□□ -1.67
CHD2-219ENST00000630016 RBM12Q9NTZ6 932 aaKnown RBP4.59□□□□□ -1.67
CHD2-219ENST00000630016 TMEM140Q9NV12 185 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 FANCLQ9NW38 375 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 TRPC5Q9UL62 973 aaPredicted RBP4.59□□□□□ -1.67
CHD2-219ENST00000630016 ROBO1Q9Y6N7 1651 aa4.59□□□□□ -1.67
CHD2-219ENST00000630016 AHDC1Q5TGY3 1603 aaPredicted RBP4.58□□□□□ -1.68
CHD2-219ENST00000630016 MROH1Q8NDA8 1641 aa4.58□□□□□ -1.68
CHD2-219ENST00000630016 NWD1Q149M9 1564 aa4.58□□□□□ -1.68
CHD2-219ENST00000630016 MAST1Q9Y2H9 1570 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms