RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 TEX28O15482 410 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 LILRB3O75022 631 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 EFEMP2O95967 443 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 TYMPP19971 482 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 TKTP29401 623 aaKnown RBP8.41□□□□□ -1.06
NR1I3-235ENST00000628566 POLR2BP30876 1174 aaKnown RBP8.41□□□□□ -1.06
NR1I3-235ENST00000628566 ATICP31939 592 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 BRCC3P46736 316 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 AARSP49588 968 aaKnown RBP eCLIP8.41□□□□□ -1.06
NR1I3-235ENST00000628566 CLCN4P51793 760 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 VAMP7P51809 220 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 BFSP1Q12934 665 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 SMAD4Q13485 552 aaKnown RBP8.41□□□□□ -1.06
NR1I3-235ENST00000628566 CTXN3Q4LDR2 81 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 RTP2Q5QGT7 225 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 OVOS1Q6IE37 1185 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 CENPPQ6IPU0 288 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 KLHL10Q6JEL2 608 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 ANKRD54Q6NXT1 300 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 FOXR2Q6PJQ5 311 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 CCDC149Q6ZUS6 474 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 TAS1R1Q7RTX1 841 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 TRAPPC11Q7Z392 1133 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 EFCAB13Q8IY85 973 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 FAM186BQ8IYM0 893 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 ADSSL1Q8N142 457 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 TMEM86AQ8N2M4 240 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 MLKLQ8NB16 471 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 LNX1Q8TBB1 728 aaPredicted RBP8.41□□□□□ -1.06
NR1I3-235ENST00000628566 SPATA18Q8TC71 538 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 TMC2Q8TDI7 906 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 SENP8Q96LD8 212 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 MFSD14AQ96MC6 490 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 RIPOR3Q96MK2 946 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 NECTIN4Q96NY8 510 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 VN1R3Q9BXE9 311 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 MTMR12Q9C0I1 747 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 METTL14Q9HCE5 456 aaKnown RBP8.41□□□□□ -1.06
NR1I3-235ENST00000628566 LMBRD1Q9NUN5 540 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 DMAC2Q9NW81 257 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 CACNG4Q9UBN1 327 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 MAN1B1Q9UKM7 699 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 PCDHGC5Q9Y5F6 944 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 CDH23Q9H251 3354 aa8.41□□□□□ -1.06
NR1I3-235ENST00000628566 PRRC2BQ5JSZ5 2229 aaKnown RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 H3BQ06 376 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 I3L4J1 428 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 BIN1O00499 593 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 CYB561D2O14569 222 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 SLC16A3O15427 465 aaKnown RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 MEFVO15553 781 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 XYLBO75191 536 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 GNA14O95837 355 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 CPB1P15086 417 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 CCNE1P24864 410 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 GTF2H1P32780 548 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 OR1D2P34982 312 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 GTF2F1P35269 517 aaKnown RBP eCLIP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 MTHFRP42898 656 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 GUCY2FP51841 1108 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 TNNC1P63316 161 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 MYL7Q01449 175 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 CETN1Q12798 172 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 SMARCB1Q12824 385 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 PAK1Q13153 545 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 RAB33AQ14088 237 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 MORC3Q14149 939 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 TPD52L1Q16890 204 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 ATAT1Q5SQI0 421 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 TPGS2Q68CL5 300 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 ISM2Q6H9L7 571 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 PRSS55Q6UWB4 352 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 C15orf39Q6ZRI6 1047 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 DPH6Q7L8W6 267 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 PALB2Q86YC2 1186 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 GLYCTKQ8IVS8 523 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 SMYD4Q8IYR2 804 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 ELMOD1Q8N336 334 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 C1orf127Q8N9H9 656 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 C3orf58Q8NDZ4 430 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 PARD3BQ8TEW8 1205 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 ERCC4Q92889 916 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 HPDLQ96IR7 371 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 B3GALT6Q96L58 329 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 CEP63Q96MT8 703 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 PIDD1Q9HB75 910 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 MAN1C1Q9NR34 630 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 ZDHHC7Q9NXF8 308 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 BARX2Q9UMQ3 279 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-235ENST00000628566 CDY1Q9Y6F8 540 aa8.4□□□□□ -1.06
NR1I3-235ENST00000628566 TRIP11Q15643 1979 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 PRRG1O14668 218 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 LINC01565O15544 149 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 TGM5O43548 720 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 TBX10O75333 385 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 OAZ2O95190 189 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CYP11A1P05108 521 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 HNRNPA1P09651 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
NR1I3-235ENST00000628566 FAM163BP0C2L3 166 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms