RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 KIF4AO95239 1232 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 FTCDO95954 541 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 TFRCP02786 760 aaKnown RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 KRT19P08727 400 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 MYBL1P10243 752 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 P4HA1P13674 534 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 ANK1P16157 1881 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 ELF2Q15723 593 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 RNF180Q86T96 592 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 MCOLN2Q8IZK6 566 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 TTC39CQ8N584 583 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 COG1Q8WTW3 980 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 CYFIP2Q96F07 1278 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 HES6Q96HZ4 224 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 PBKQ96KB5 322 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 TSEN34Q9BSV6 310 aaKnown RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 AVENQ9NQS1 362 aaPredicted RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 SAGE1Q9NXZ1 904 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 COG5Q9UP83 839 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 PIN4Q9Y237 131 aaKnown RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 NOC2LQ9Y3T9 749 aaKnown RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 V9GYY5 206 aaPredicted RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 M0QZ92 97 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 PDE2AO00408 941 aaPredicted RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 FKTNO75072 461 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 PAEPP09466 180 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 KCNE1P15382 129 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 MGAT3Q09327 533 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 FAM228AQ86W67 206 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 PHF13Q86YI8 300 aaPredicted RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 HPDLQ96IR7 371 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 RPS6KC1Q96S38 1066 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 TRIM6Q9C030 488 aaPredicted RBP12.53□□□□□ -0.4
CCDC163-201ENST00000625766 ZNF518BQ9C0D4 1074 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 AMFRQ9UKV5 643 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 PCDHGC3Q9UN70 934 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
CCDC163-201ENST00000625766 CHRNA1P02708 482 aa12.52□□□□□ -0.4
CCDC163-201ENST00000625766 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.4
CCDC163-201ENST00000625766 CFAP221Q4G0U5 840 aa12.52□□□□□ -0.4
CCDC163-201ENST00000625766 C11orf63Q6NUN7 778 aa12.52□□□□□ -0.4
CCDC163-201ENST00000625766 SENP6Q9GZR1 1112 aaPredicted RBP12.52□□□□□ -0.4
CCDC163-201ENST00000625766 CTTNBP2NLQ9P2B4 639 aa12.52□□□□□ -0.4
CCDC163-201ENST00000625766 NXF1Q9UBU9 619 aaKnown RBP12.52□□□□□ -0.4
CCDC163-201ENST00000625766 ALG6Q9Y672 507 aa12.52□□□□□ -0.4
CCDC163-201ENST00000625766 MOXD2PA6NHM9 499 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 THAP12O43422 761 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 LSM8O95777 96 aaKnown RBP12.52□□□□□ -0.41
CCDC163-201ENST00000625766 CALCAP01258 141 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 TUBBP07437 444 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 CYP3A5P20815 502 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 CDH5P33151 784 aaPredicted RBP12.52□□□□□ -0.41
CCDC163-201ENST00000625766 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 NOMO3P69849 1222 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 LHX8Q68G74 356 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 LRRC52Q8N7C0 313 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 SMG8Q8ND04 991 aaKnown RBP12.52□□□□□ -0.41
CCDC163-201ENST00000625766 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 BEST2Q8NFU1 509 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 UBQLN1Q9UMX0 589 aaKnown RBP12.52□□□□□ -0.41
CCDC163-201ENST00000625766 POLIQ9UNA4 740 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 ST3GAL5Q9UNP4 418 aa12.52□□□□□ -0.41
CCDC163-201ENST00000625766 SMIM28A0A1B0GU29 152 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 GPR182O15218 404 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 CILPO75339 1184 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 RPS6KA5O75582 802 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 RECQL4O94761 1208 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 CD4P01730 458 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 CD58P19256 250 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 NSFP46459 744 aaKnown RBP12.51□□□□□ -0.41
CCDC163-201ENST00000625766 ACLYP53396 1101 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
CCDC163-201ENST00000625766 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 PTK7Q13308 1070 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 ITGA7Q13683 1181 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 PTGISQ16647 500 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 MON1BQ7L1V2 547 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 MMGT1Q8N4V1 131 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 MSANTD4Q8NCY6 345 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 WHAMMQ8TF30 809 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 CPA5Q8WXQ8 436 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 WNT8BQ93098 351 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 CAPZA3Q96KX2 299 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 ZSWIM1Q9BR11 485 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 LHX5Q9H2C1 402 aa12.51□□□□□ -0.41
CCDC163-201ENST00000625766 NXF3Q9H4D5 531 aaKnown RBP12.51□□□□□ -0.41
CCDC163-201ENST00000625766 CNOT8Q9UFF9 292 aaKnown RBP12.51□□□□□ -0.41
CCDC163-201ENST00000625766 KIAA1257Q9ULG3 409 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms