RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 ITGB3P05106 788 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 PLEKP08567 350 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 RPL9P32969 192 aaKnown RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 VAV2P52735 878 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 ZNF132P52740 706 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 FAAP100Q0VG06 881 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 MYO1EQ12965 1108 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 ARHGAP44Q17R89 818 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 ZNF699Q32M78 642 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 ZNF667Q5HYK9 610 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 FAM109BQ6ICB4 259 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 PPP1R2P3Q6NXS1 205 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 DPH6Q7L8W6 267 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 RTN4RL1Q86UN2 441 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 GSTCDQ8NEC7 633 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 KAT5Q92993 513 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 CALR3Q96L12 384 aaKnown RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 ADAM2Q99965 735 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 PI4K2AQ9BTU6 479 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 IFIH1Q9BYX4 1025 aaKnown RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 TSGA10Q9BZW7 698 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 UBE2OQ9C0C9 1292 aaKnown RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 DEF6Q9H4E7 631 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 GDAP2Q9NXN4 497 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 NAGPAQ9UK23 515 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 NOCTQ9UK39 431 aaKnown RBP12.61□□□□□ -0.39
LINC00963-220ENST00000625171 HES2Q9Y543 173 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 RALGAPA2Q2PPJ7 1873 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 CITO14578 2027 aa12.61□□□□□ -0.39
LINC00963-220ENST00000625171 A0A087X0T9 212 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 USP27XA6NNY8 438 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 DDX3XO00571 662 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 PTGESO14684 152 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 KRT86O43790 486 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 MGEA5O60502 916 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 PAEPP09466 180 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 FAM228BP0C875 321 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 CYP11B1P15538 503 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 ATF7P17544 494 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 AKAP5P24588 427 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 RFC2P35250 354 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 ARHGAP25P42331 645 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 ASPAP45381 313 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 TDRD12Q587J7 1177 aaKnown RBP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 ALKBH5Q6P6C2 394 aaKnown RBP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 ECHDC2Q86YB7 292 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■□ 21.4
LINC00963-220ENST00000625171 PIAS4Q8N2W9 510 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 RNF10Q8N5U6 811 aaKnown RBP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 HPDLQ96IR7 371 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 AGPAT1Q99943 283 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 COL25A1Q9BXS0 654 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 OSBPL7Q9BZF2 842 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 ISCUQ9H1K1 167 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 PARP2Q9UGN5 583 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 TBX21Q9UL17 535 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 KIAA1257Q9ULG3 409 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 R3HCC1Q9Y3T6 440 aaKnown RBP12.6□□□□□ -0.39
LINC00963-220ENST00000625171 PCDHA13Q9Y5I0 950 aa12.6□□□□□ -0.39
LINC00963-220ENST00000625171 A0A0A6YYK5 440 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-220ENST00000625171 NBNO60934 754 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 OFD1O75665 1012 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 THP07101 528 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 SYN1P17600 705 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 MAGEA1P43355 309 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 ETF1P62495 437 aaKnown RBP12.59□□□□□ -0.39
LINC00963-220ENST00000625171 CDR2Q01850 454 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 KIF5AQ12840 1032 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 WDR72Q3MJ13 1102 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 C9orf57Q5W0N0 161 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 CRIPAKQ8N1N5 446 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 SPATA18Q8TC71 538 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
LINC00963-220ENST00000625171 RRAGDQ9NQL2 400 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-220ENST00000625171 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 KANSL3Q9P2N6 904 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 AGAP1Q9UPQ3 857 aa12.59□□□□□ -0.39
LINC00963-220ENST00000625171 SPTBN5Q9NRC6 3674 aaKnown RBP12.59□□□□□ -0.39
LINC00963-220ENST00000625171 ARL5CA6NH57 179 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 ENPP3O14638 875 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 CYP26A1O43174 497 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 TACC1O75410 805 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 CHRNB2P17787 502 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 TNFAIP3P21580 790 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 POLR2BP30876 1174 aaKnown RBP12.58□□□□□ -0.4
LINC00963-220ENST00000625171 PDE6CP51160 858 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 ARID5AQ03989 594 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 TLE2Q04725 743 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 GFPT1Q06210 699 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-220ENST00000625171 SCARA3Q6AZY7 606 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 SPOPLQ6IQ16 392 aa12.58□□□□□ -0.4
LINC00963-220ENST00000625171 TRIM72Q6ZMU5 477 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms