RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 RPGRIP1Q96KN7 1286 aa15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 ZNF560Q96MR9 790 aa15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 FNBP1Q96RU3 617 aa15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 PHF7Q9BWX1 381 aaPredicted RBP15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 PIDD1Q9HB75 910 aa15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 CDH22Q9UJ99 828 aa15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 MAPK8IP1Q9UQF2 711 aa15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 TIMM13Q9Y5L4 95 aaPredicted RBP15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 ANK1P16157 1881 aa15.1■□□□□ 0.01
PCDHGC3-208ENST00000622836 CCDC195A0A1B0GUA6 201 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 M0QZQ0 153 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 PIRO00625 290 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 CALUO43852 315 aaPredicted RBP15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 GADD45BO75293 160 aaPredicted RBP15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 RFPL2O75678 378 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 ITGB3P05106 788 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 TNNI1P19237 187 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 SP100P23497 879 aaPredicted RBP15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 POLR2BP30876 1174 aaKnown RBP15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 PNPLA4P41247 253 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 RAB33AQ14088 237 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 LMBRD2Q68DH5 695 aaPredicted RBP15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 RSPO2Q6UXX9 243 aaPredicted RBP15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 CSGALNACT2Q8N6G5 542 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 SMARCE1Q969G3 411 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 TIGD1Q96MW7 591 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 MTMR12Q9C0I1 747 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 FBXL5Q9UKA1 691 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 AGAP1Q9UPQ3 857 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
PCDHGC3-208ENST00000622836 BDP1A6H8Y1 2624 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 ANO9A1A5B4 782 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 PDXKO00764 312 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 NR3C1P04150 777 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 CPB1P15086 417 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 ELF1P32519 619 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 AARSP49588 968 aaKnown RBP eCLIP15.08■□□□□ 0
PCDHGC3-208ENST00000622836 CYP24A1Q07973 514 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 DUOXA2Q1HG44 320 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 SV2CQ496J9 727 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 PPM1LQ5SGD2 360 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 OVOS1Q6IE37 1185 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 LILRA6Q6PI73 481 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 C15orf39Q6ZRI6 1047 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 GPR149Q86SP6 731 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 METTL23Q86XA0 190 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 C12orf56Q8IXR9 622 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 C1orf127Q8N9H9 656 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 SMG7Q92540 1137 aaKnown RBP15.08■□□□□ 0
PCDHGC3-208ENST00000622836 SENP8Q96LD8 212 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 GSDMAQ96QA5 445 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 KCTD10Q9H3F6 313 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 POMKQ9H5K3 350 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 ZDHHC7Q9NXF8 308 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 FBXW11Q9UKB1 542 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 ITGA11Q9UKX5 1188 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 C5orf42Q9H799 3197 aa15.08■□□□□ 0
PCDHGC3-208ENST00000622836 KPNA7A9QM74 516 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 CYB561D2O14569 222 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 PRRG1O14668 218 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 SPTLC1O15269 473 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 PRPF40AO75400 957 aaKnown RBP15.07■□□□□ 0
PCDHGC3-208ENST00000622836 ZMYND10O75800 440 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 CLSTN1O94985 981 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 C8AP07357 584 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 TYMPP19971 482 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 RBP5P82980 135 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 ROR1Q01973 937 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 BFSP1Q12934 665 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 MRPL58Q14197 206 aaKnown RBP15.07■□□□□ 0
PCDHGC3-208ENST00000622836 PSMD6Q15008 389 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 CEP135Q66GS9 1140 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 SLC8B1Q6J4K2 584 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 CCDC149Q6ZUS6 474 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 WDR49Q8IV35 697 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 SMYD4Q8IYR2 804 aaPredicted RBP15.07■□□□□ 0
PCDHGC3-208ENST00000622836 CMASQ8NFW8 434 aaPredicted RBP15.07■□□□□ 0
PCDHGC3-208ENST00000622836 SLC7A14Q8TBB6 771 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 ERCC4Q92889 916 aaPredicted RBP15.07■□□□□ 0
PCDHGC3-208ENST00000622836 FAM84AQ96KN4 292 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 INTS13Q9NVM9 706 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 DSEQ9UL01 958 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 POLIQ9UNA4 740 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 FRMD4BQ9Y2L6 1034 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 NR2E1Q9Y466 385 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 PCDHA5Q9Y5H7 936 aa15.07■□□□□ 0
PCDHGC3-208ENST00000622836 OAZ2O95190 189 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 UBE2HP62256 183 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 MYO1EQ12965 1108 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 CYP26C1Q6V0L0 522 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 GUF1Q8N442 669 aaKnown RBP15.06■□□□□ 0
PCDHGC3-208ENST00000622836 LRRC52Q8N7C0 313 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 OR5B17Q8NGF7 314 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 ZNF461Q8TAF7 563 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 CGRRF1Q99675 332 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 OXCT2Q9BYC2 517 aaPredicted RBP15.06■□□□□ 0
PCDHGC3-208ENST00000622836 PRKD2Q9BZL6 878 aa15.06■□□□□ 0
PCDHGC3-208ENST00000622836 CD320Q9NPF0 282 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms