RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 SYT11Q9BT88 431 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 TRAIPQ9BWF2 469 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 APOL6Q9BWW8 343 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 XYLT2Q9H1B5 865 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 AGO3Q9H9G7 860 aaKnown RBP7.5□□□□□ -1.21
CBWD3-219ENST00000622817 NAGPAQ9UK23 515 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 PADI3Q9ULW8 664 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 NENFQ9UMX5 172 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 GUCA1BQ9UMX6 200 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 CNTN6Q9UQ52 1028 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 PAXBP1Q9Y5B6 917 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 PCDHB4Q9Y5E5 795 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 PCDHB2Q9Y5E7 798 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 ANK1P16157 1881 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 ATP8B3O60423 1300 aa7.5□□□□□ -1.21
CBWD3-219ENST00000622817 A0A0U1RQJ8 604 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SMIM28A0A1B0GU29 152 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 STAU1O95793 577 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CD4P01730 458 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SKIP12755 728 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ITGA4P13612 1032 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CYP11B1P15538 503 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ACO1P21399 889 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 AKAP5P24588 427 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 POLR2BP30876 1174 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 PDE6CP51160 858 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 MYO1EQ12965 1108 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 BFSP2Q13515 415 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ZBTB6Q15916 424 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 PKN2Q16513 984 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ALKBH5Q6P6C2 394 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 FBXO46Q6PJ61 603 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SYT10Q6XYQ8 523 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 FAM43BQ6ZT52 329 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SLC47A2Q86VL8 602 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ZNF677Q86XU0 584 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 GLYCTKQ8IVS8 523 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CXorf38Q8TB03 319 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 EPS8L1Q8TE68 723 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 U2AF1L4Q8WU68 220 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ATRIPQ8WXE1 791 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ZNF592Q92610 1267 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 RNF166Q96A37 237 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 HPDLQ96IR7 371 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ZMAT2Q96NC0 199 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 LACRTQ9GZZ8 138 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 FAM105AQ9NUU6 356 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SEPT11Q9NVA2 429 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 NOCTQ9UK39 431 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 INTUQ9ULD6 942 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 UBQLN1Q9UMX0 589 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 AGAP1Q9UPQ3 857 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CITO14578 2027 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 UMODL1Q5DID0 1318 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 RCCD1A6NED2 376 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 TLR3O15455 904 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ZNF623O75123 536 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 TFRCP02786 760 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 HSPA8P11142 646 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SELPP16109 830 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ATF7P17544 494 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CYP3A5P20815 502 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CASQ1P31415 396 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ASPAP45381 313 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 GUCY2FP51841 1108 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CDR2Q01850 454 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 DSC3Q14574 896 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 WDR72Q3MJ13 1102 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ZNF569Q5MCW4 686 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SCARA3Q6AZY7 606 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 TRAF7Q6Q0C0 670 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 TMEM270Q6UE05 265 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 MRPL10Q7Z7H8 261 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 NOP9Q86U38 636 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 FAM126BQ8IXS8 530 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 RPUSD2Q8IZ73 545 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 TTC39CQ8N584 583 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 RNF10Q8N5U6 811 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 LRRC52Q8N7C0 313 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 UBR7Q8N806 425 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 RBBP8NLQ8NC74 664 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 OLIG1Q8TAK6 271 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 LNX1Q8TBB1 728 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SLC20A1Q8WUM9 679 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SECISBP2LQ93073 1101 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 ZNF333Q96JL9 665 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 BCO2Q9BYV7 579 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 FAM124BQ9H5Z6 455 aaPredicted RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CYP3A43Q9HB55 503 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 SLC24A3Q9HC58 644 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 CISHQ9NSE2 258 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 NXF1Q9UBU9 619 aaKnown RBP7.49□□□□□ -1.21
CBWD3-219ENST00000622817 DNAI1Q9UI46 699 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 GIT1Q9Y2X7 761 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 RALGAPA2Q2PPJ7 1873 aa7.49□□□□□ -1.21
CBWD3-219ENST00000622817 BTNL10A8MVZ5 291 aa7.48□□□□□ -1.21
CBWD3-219ENST00000622817 ZMYND10O75800 440 aa7.48□□□□□ -1.21
CBWD3-219ENST00000622817 ABL1P00519 1130 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms