RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ATICP31939 592 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 PBX3P40426 434 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 GSE1Q14687 1217 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 EXOC3L4Q17RC7 722 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 DCLRE1AQ6PJP8 1040 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 LMO3Q8TAP4 145 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 SEMA4DQ92854 862 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 ZNF558Q96NG5 402 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 ERGIC2Q96RQ1 377 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 PAAF1Q9BRP4 392 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 XPO4Q9C0E2 1151 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 XYLT2Q9H1B5 865 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 VRTNQ9H8Y1 702 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 GRPEL1Q9HAV7 217 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 ALG13Q9NP73 1137 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 GCNT4Q9P109 453 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 CACNG4Q9UBN1 327 aa21.34■■□□□ 1.01
PDLIM2-221ENST00000622702 TMEM189-UBE2V1I3L0A0 370 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 PPEF2O14830 753 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 GRM6O15303 877 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 ASS1P00966 412 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 ALDH2P05091 517 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 GALTP07902 379 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 PNPLA4P41247 253 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 BCAR1P56945 870 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 MYL6P60660 151 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 PLCB2Q00722 1185 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 SGSM1Q2NKQ1 1148 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 EHBP1Q8NDI1 1231 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 TAF4BQ92750 862 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 ZNF560Q96MR9 790 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 CRACR2AQ9BSW2 395 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 MTCH2Q9Y6C9 303 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 SCN1AP35498 2009 aa21.33■■□□□ 1.01
PDLIM2-221ENST00000622702 PLXNA4Q9HCM2 1894 aa21.33■■□□□ 1
PDLIM2-221ENST00000622702 A0A1W2PQC6 194 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 ITGB1P05556 798 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 POU3F3P20264 500 aaPredicted RBP21.32■■□□□ 1
PDLIM2-221ENST00000622702 PAX3P23760 479 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 OR1G1P47890 313 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 SLC11A1P49279 550 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 ALDH7A1P49419 539 aaKnown RBP21.32■■□□□ 1
PDLIM2-221ENST00000622702 KCNMA1Q12791 1236 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 HPDLQ96IR7 371 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 IMPG2Q9BZV3 1241 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 TRIM5Q9C035 493 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 INTS2Q9H0H0 1204 aaKnown RBP21.32■■□□□ 1
PDLIM2-221ENST00000622702 NT5C1B-RDH14C9J2C7 533 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 NRP1O14786 923 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 LRRN2O75325 713 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 FGF18O76093 207 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 B3GAT3O94766 335 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 PON1P27169 355 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 TAF6P49848 677 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 MYO1EQ12965 1108 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 SYCP1Q15431 976 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 C3orf58Q8NDZ4 430 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 LMCD1Q9NZU5 365 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 SIK3Q9Y2K2 1263 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 FAN1Q9Y2M0 1017 aa21.32■■□□□ 1
PDLIM2-221ENST00000622702 SLC9A1P19634 815 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 PPM1AP35813 382 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 PBX1P40424 430 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 AARSP49588 968 aaKnown RBP eCLIP21.31■■□□□ 1
PDLIM2-221ENST00000622702 LILRA4P59901 499 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 PTPROQ16827 1216 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 ZNF699Q32M78 642 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 SV2CQ496J9 727 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 TRIM65Q6PJ69 517 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 CD300LGQ6UXG3 332 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 MICALL1Q8N3F8 863 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 CCDC150Q8NCX0 1101 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 SPPL3Q8TCT6 385 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 RABGGTAQ92696 567 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 MRPL38Q96DV4 380 aaKnown RBP21.31■■□□□ 1
PDLIM2-221ENST00000622702 FAXDC2Q96IV6 333 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 PI4K2AQ9BTU6 479 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 COLEC11Q9BWP8 271 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 SPG21Q9NZD8 308 aa21.31■■□□□ 1
PDLIM2-221ENST00000622702 PRG3Q9Y2Y8 225 aaPredicted RBP21.31■■□□□ 1
PDLIM2-221ENST00000622702 PRRC2BQ5JSZ5 2229 aaKnown RBP21.3■■□□□ 1
PDLIM2-221ENST00000622702 SPTLC1O15269 473 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 KIF4AO95239 1232 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 MRE11P49959 708 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 NOP14P78316 857 aaKnown RBP21.3■■□□□ 1
PDLIM2-221ENST00000622702 WDR44Q5JSH3 913 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 DPY19L2P1Q6NXN4 242 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 SLC39A11Q8N1S5 342 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 MAFAQ8NHW3 353 aaPredicted RBP21.3■■□□□ 1
PDLIM2-221ENST00000622702 LMAN2LQ9H0V9 348 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 PLCB1Q9NQ66 1216 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 MARCH5Q9NX47 278 aa21.3■■□□□ 1
PDLIM2-221ENST00000622702 PRUNE2Q8WUY3 3088 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 CSPG5O95196 566 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 IGFBP6P24592 240 aaPredicted RBP21.29■■□□□ 1
PDLIM2-221ENST00000622702 DNAJB1P25685 340 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 ZNF75DP51815 510 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 CCDC85BQ15834 202 aaPredicted RBP21.29■■□□□ 1
PDLIM2-221ENST00000622702 POF1BQ8WVV4 589 aa21.29■■□□□ 1
PDLIM2-221ENST00000622702 PPM1EQ8WY54 764 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms